User:Karsten Theis/Animation course

Animate a scene with Jmol

Load the scene and choose a look

Open and use the viewing guide to explore the scene.

Choose a background

How do you want the opioid to look like?

Decide how and whether to show the protein

Save some orientations

Transition between orientations

Select a transition speed:

Go to different views:

Dock a ligand

Click and drag on the ligand to move it. Alt-click and drag on the ligand to rotate it. Click and drag away from the ligand to adjust the view. To store each consecutive ligand position, consecutively click on the links below:

Recall ligand position

Clicking on the links below will restore the ligand position (scene0 is the original position in the binding pocket):

To animate, click below

Collection of molecules

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