Resolvase
From Proteopedia
(Difference between revisions)
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</StructureSection> | </StructureSection> | ||
| - | ==3D structures of resolvase== | ||
| - | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
| - | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
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| - | * Holliday junction resolvase | ||
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| - | **[[2wiw]], [[2wiz]], [[2wj0]] – AfHJR+DNA – ''Archaeoglobus fulgidus''<br /> | ||
| - | **[[2wcw]], [[2wcz]] – AfHJR (mutant)<br /> | ||
| - | **[[2h8c]] – EcHJR RusA (mutant) + DNA – ''Escherichia coli''<br /> | ||
| - | **[[1gdt]] - EcHJR +DNA<br /> | ||
| - | **[[2h8e]] - EcHJR RusA (mutant)<br /> | ||
| - | **[[1q8r]] – EcHJR RusA<br /> | ||
| - | **[[1hjr]] – EcHJR RuvC<br /> | ||
| - | **[[4ep4]] – TtHJR RuvC – ''Thermus thermophilus''<br /> | ||
| - | **[[4ep5]] – TtHJR RuvC (mutant)<br /> | ||
| - | **[[1zp7]] – BsHJR RecU – ''Bacillus subtilis''<br /> | ||
| - | **[[5fdk]] - BsHJR RecU (mutant) + DNA<br /> | ||
| - | **[[1ob8]], [[1ob9]], [[1hh1]], [[2eo0]] – SsHJR – ''Sulfolobus solfataricus''<br /> | ||
| - | **[[4tkd]], [[4tkk]] - SsHJR (mutant) - <br /> | ||
| - | **[[2fco]] – HJR – ''Geobacillus kaustophilus''<br /> | ||
| - | **[[1ipi]], [[1gef]] – PfHJR – ''Pyrococcus furiosus''<br /> | ||
| - | **[[1kcf]] – HJR – fission yeast<br /> | ||
| - | **[[1bvs]] - RuvA - ''Mycobacterium leprae''<br /> | ||
| - | **[[5e6f]] - HJR - canarypox virus<br /> | ||
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| - | * Ser-recombinase | ||
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| - | **[[2rsl]] - EcGDR<br /> | ||
| - | **[[1hx7]] – EcGDR N-terminal – NMR<br /> | ||
| - | **[[1ght]], [[1res]], [[1ret]], [[1ght]] – EcGDR catalytic domain – NMR<br /> | ||
| - | **[[1gdr]], [[1hx7]] - EcGDR catalytic domain<br /> | ||
| - | **[[2gm4]], [[1zr2]], [[1zr4]], [[1gdt]] – EcGDR+DNA<br /> | ||
| - | **[[2gm5]] – EcGDR (mutant)<br /> | ||
| - | **[[3guv]] – Sp-site-specific recombinase – ''Streptococcus pneumoniae''<br /> | ||
| - | **[[2r0q]] – SaS-rec+DNA – ''Staphylococcus aureus''<br /> | ||
| - | **[[3pkz]] - SaS-sin (mutant)<br /> | ||
| - | **[[3lhf]] – SsS-rec<br /> | ||
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| - | * Tyr-recombinase | ||
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| - | **[[3etl]], [[3ew9]], [[3ewa]], [[2i1q]] – MmRadA Rec+AMPPNP+ion – ''Methanococcus maripaludis''<br /> | ||
| - | **[[2b21]] - MmRadA Rec+AMPPNP<br /> | ||
| - | **[[2zub]], [[2zuc]], [[2zud]], [[2dfl]] – SsRadA<br /> | ||
| - | **[[2cvf]], [[2cvh]] – RadB Rec – ''Thermococcus kodakarensis''<br /> | ||
| - | **[[2f1h]], [[2fpl]], [[2fpm]] - MvRec+AMPPNP+K – ''Methanococcus voltae''<br /> | ||
| - | **[[2f1i]] – MvRec+AMPPNP<br /> | ||
| - | **[[2f1j]], [[2fpk]] - MvRec+ADP<br /> | ||
| - | **[[1a0p]] – EcXerD Rec<br /> | ||
| - | **[[5dcf]] - EcXerD C-terminal/FTSK<br /> | ||
| - | **[[5hxy]] - XerD - ''Thermoplasma acidophilum''<br /> | ||
| - | **[[5jjv]], [[5jk0]] - XerH - ''Helicobacter pylori''<br /> | ||
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| - | * Cre recombinase | ||
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| - | **[[3mgv]], [[3c28]], [[3c29]], [[2hof]], [[2hoi]], [[1xns]], [[1xo0]], [[1pvp]], [[1pvq]], [[1pvr]], [[1nzb]], [[1ouq]], [[1q3u]], [[1q3v]], [[1ma7]], [[1kbu]], [[1drg]], [[1f44]], [[2crx]], [[3crx]], [[4crx]], [[5crx]], [[1crx]] – EpCre+DNA – Enterobacteria phage PI<br /> | ||
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| - | *Hin recombinase | ||
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| - | **[[1hcr]], [[1ijw]], [[1ijj6]], [[1jj8]], [[1jko]], [[1jkp]], [[1jkq]], [[1jkr]] – HRec + DNA – synthetic <br /> | ||
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| - | *RadA recombinase | ||
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| - | **[[2zub]], [[2zuc]], [[2zud]], [[2dfl]] – SsRadA <br /> | ||
| - | **[[4dc9]] – MvRadA C-terminal domain <br /> | ||
| - | **[[2i1q]] – MvRadA (mutant) <br /> | ||
| - | **[[1pzn]], [[5fos]], [[5fot]], [[5fou]], [[5fox]], [[5fpk]], [[5fov]], [[5fow]] – PfRadA <br /> | ||
| - | **[[4a6p]] – PfRadA ATPase domain (mutant) <br /> | ||
| - | **[[5lkq]] - SpRadA protease domain<br /> | ||
| - | **[[5j4l]], [[5jec]], [[5jed]], [[5jee]], [[5kdd]], [[5l8v]], [[5lb2]], [[5lb4]], [[5lbi]], [[5jfg]] - PfRadA (mutant)<br /> | ||
| - | **[[5h45]] - TtRadA C-terminal<br /> | ||
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| - | *RadA recombinase complex | ||
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| - | **[[5fot]], [[5fou]], [[5fov]], [[5fow]], [[5fpk]], [[4b3b]] – PfRadA ATPase domain + tetrapeptide <br /> | ||
| - | **[[4d6p]] – PfRadA ATPase domain (mutant) + AMPPNP <br /> | ||
| - | **[[4uqo]] – PfRadA ATPase domain (mutant) + ADP <br /> | ||
| - | **[[4b2i]] – PfRadA ATPase domain (mutant) + indazole <br /> | ||
| - | **[[4b2l]], [[4b35]] – PfRadA ATPase domain (mutant) + methylester tryplophan <br /> | ||
| - | **[[4b32]], [[4b33]] – PfRadA ATPase domain (mutant) + naphthol <br /> | ||
| - | **[[4b34]] – PfRadA ATPase domain (mutant) + aminobenzothiazole <br /> | ||
| - | **[[4b3c]], [[4b3d]], [[5j4h]], [[5j4k]] – PfRadA ATPase domain (mutant) + indole derivative <br /> | ||
| - | **[[4a6x]] – PfRadA ATPase domain (mutant) + ATP <br /> | ||
| - | **[[3ntu]], [[2gdj]] – MvRadA + AMPPNP <br /> | ||
| - | **[[2b21]], [[2f1h]], [[2f1i]], [[2fpl]], [[2fpm]] – MvRadA (mutant) + AMPPNP <br /> | ||
| - | **[[3fyh]], [[2f1j]], [[2fpk]] – MvRadA (mutant) + ADP <br /> | ||
| - | **[[3etl]], [[3ew9]], [[3ewa]] – MmRadA (mutant) + AMPPNP <br /> | ||
| - | **[[5lkm]] - SpRadA + TDP<br /> | ||
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| - | *RadB recombinase | ||
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| - | **[[2cvf]], [[2cvh]] – TkRadB <br /> | ||
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| - | *Integrase see [[Integrase]] and [[Retroviral Integrase]] | ||
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| - | *Recombinase A (RecA) see [[Recombinase A]] | ||
| - | }} | ||
==References== | ==References== | ||
<references /> | <references /> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 10:46, 8 December 2019
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References
- ↑ West SC. The search for a human Holliday junction resolvase. Biochem Soc Trans. 2009 Jun;37(Pt 3):519-26. doi: 10.1042/BST0370519. PMID:19442245 doi:http://dx.doi.org/10.1042/BST0370519
- ↑ Haldenby S, White MF, Allers T. RecA family proteins in archaea: RadA and its cousins. Biochem Soc Trans. 2009 Feb;37(Pt 1):102-7. doi: 10.1042/BST0370102. PMID:19143611 doi:http://dx.doi.org/10.1042/BST0370102
- ↑ Dhar G, Sanders ER, Johnson RC. Architecture of the hin synaptic complex during recombination: the recombinase subunits translocate with the DNA strands. Cell. 2004 Oct 1;119(1):33-45. PMID:15454079 doi:http://dx.doi.org/10.1016/j.cell.2004.09.010
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