Pyrroline-5-carboxylate dehydrogenase

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*Pyrroline-5-carboxylate dehydrogenase
*Pyrroline-5-carboxylate dehydrogenase
 +
**[[3v9g]], [[4oe5]] – hPCD – human<BR />
 +
**[[3v9h]], [[3v9i]] – hPCD (mutant) <BR />
 +
**[[3v9j]], [[4lgz]], [[4e3x]] – mPCD – mouse<BR />
 +
**[[4oe6]] – yPCD – yeast<br />
**[[1uzb]] - TtPCD –''Termus thermophilus''<BR />
**[[1uzb]] - TtPCD –''Termus thermophilus''<BR />
**[[4k57]] - TtPCD (mutant)<BR />
**[[4k57]] - TtPCD (mutant)<BR />
-
**[[4oe6]] – yPCD – yeast<br />
 
**[[3qan]] – PCD – ''Bacillus halodurans''<BR />
**[[3qan]] – PCD – ''Bacillus halodurans''<BR />
**[[3rjl]] - PCD – ''Bacillus licheniformis''<BR />
**[[3rjl]] - PCD – ''Bacillus licheniformis''<BR />
-
**[[3v9g]], [[4oe5]] – hPCD – human<BR />
 
-
**[[3v9h]], [[3v9i]] – hPCD (mutant) <BR />
 
-
**[[3v9j]], [[4lgz]], [[4e3x]] – mPCD – mouse<BR />
 
**[[4idm]] – MtPCD – ''Mycobacterium tuberculosis''<br />
**[[4idm]] – MtPCD – ''Mycobacterium tuberculosis''<br />
**[[4ids]], [[4jdc]] - MtPCD (mutant)<br />
**[[4ids]], [[4jdc]] - MtPCD (mutant)<br />
Line 31: Line 31:
*PCD complex with cofactor
*PCD complex with cofactor
-
**[[2bhp]], [[2bja]]– TtPCD + NAD<BR />
+
**[[3v9l]] - mPCD + NAD<BR />
-
**[[4ihi]] - MtPCD + NAD<BR />
+
**[[4oe4]] - yPCD + NAD <BR />
**[[4oe4]] - yPCD + NAD <BR />
 +
**[[2bhp]], [[2bja]] – TtPCD + NAD<BR />
**[[2ehq]] - TtPCD + NADP<BR />
**[[2ehq]] - TtPCD + NADP<BR />
-
**[[3v9l]] - mPCD + NAD<BR />
 
**[[2bhq]] - TtPCD + glutamate + NAD<BR />
**[[2bhq]] - TtPCD + glutamate + NAD<BR />
**[[2bjk]] - TtPCD + citrate + NAD<BR />
**[[2bjk]] - TtPCD + citrate + NAD<BR />
Line 43: Line 42:
**[[2eiw]], [[2ej6]], [[2j40]] - TtPCD + proline + NAD<BR />
**[[2eiw]], [[2ej6]], [[2j40]] - TtPCD + proline + NAD<BR />
**[[2j5n]] - TtPCD + glycine + NAD<BR />
**[[2j5n]] - TtPCD + glycine + NAD<BR />
 +
**[[4ihi]] - MtPCD + NAD<BR />
**[[4ns3]] - MtPCD (mutant) + cobalamin + NAD<br />
**[[4ns3]] - MtPCD (mutant) + cobalamin + NAD<br />
Line 51: Line 51:
**[[4lh2]] - mPCD + succinate<br />
**[[4lh2]] - mPCD + succinate<br />
**[[4lh3]] - mPCD + glutarate<br />
**[[4lh3]] - mPCD + glutarate<br />
-
**[[3v9k]]] - mPCD + proline
+
**[[3v9k]] - mPCD + proline
**[[4lem]] - MtPCD (mutant) + cobalamin<br />
**[[4lem]] - MtPCD (mutant) + cobalamin<br />
**[[2iy6]] - TtPCD + citrate<br />
**[[2iy6]] - TtPCD + citrate<br />

Revision as of 07:26, 13 October 2020

Mouse pyrroline-5-carboxylate dehydrogenase dimer complex with glutarate and PEG400 (PDB entry 4lh3)

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3D structures of pyrroline-5-carboxylate dehydrogenase

Updated on 13-October-2020

References

  1. Deuschle K, Funck D, Forlani G, Stransky H, Biehl A, Leister D, van der Graaff E, Kunze R, Frommer WB. The role of [Delta]1-pyrroline-5-carboxylate dehydrogenase in proline degradation. Plant Cell. 2004 Dec;16(12):3413-25. Epub 2004 Nov 17. PMID:15548746 doi:http://dx.doi.org/10.1105/tpc.104.023622
  2. Geraghty MT, Vaughn D, Nicholson AJ, Lin WW, Jimenez-Sanchez G, Obie C, Flynn MP, Valle D, Hu CA. Mutations in the Delta1-pyrroline 5-carboxylate dehydrogenase gene cause type II hyperprolinemia. Hum Mol Genet. 1998 Sep;7(9):1411-5. PMID:9700195
  3. Pemberton TA, Tanner JJ. Structural basis of substrate selectivity of Delta-pyrroline-5-carboxylate dehydrogenase (ALDH4A1): Semialdehyde chain length. Arch Biochem Biophys. 2013 Aug 6. pii: S0003-9861(13)00231-2. doi:, 10.1016/j.abb.2013.07.024. PMID:23928095 doi:10.1016/j.abb.2013.07.024

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

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