User:Karsten Theis/Sandbox 3

From Proteopedia

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==Your Heading Here (maybe something like 'Structure')==
 
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<StructureSection load='2y04' size='340' side='right' caption='Caption for this structure' scene=''>
 
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This is a default text for your page '''Karsten Theis/Sandbox 3'''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
 
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You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
 
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== Function ==
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== Proteopedia annotated bibliography ==
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== Disease ==
 
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== Relevance ==
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https://www.learntechlib.org/p/35558/
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<scene name='60/609966/Subutamol/1'>TextToBeDisplayed</scene>
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<scene name='60/609966/Subutamol/2'>TextToBeDisplayed</scene>
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https://online.ucpress.edu/abt/article/74/4/278/18418/Unfolding-Proteins
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https://sciencecases.lib.buffalo.edu/cs/files/ricin.pdf
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<scene name='60/609966/Subutamol/3'>TextToBeDisplayed</scene>
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https://faseb.onlinelibrary.wiley.com/doi/abs/10.1096/fasebj.25.1_supplement.575.1
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<jmol>
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https://faseb.onlinelibrary.wiley.com/doi/abs/10.1096/fasebj.24.1_supplement.16.1
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<jmolLink>
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<script> slab on; depth 40; var a = [90,80,70,60,55,54,53,52,51]; for(var i IN a) {slab @i; delay 0.4;}
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</script>
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<text>Slab into center of molecule</text>
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</jmolLink>
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</jmol>
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== Structural highlights ==
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https://iubmb.onlinelibrary.wiley.com/doi/full/10.1002/bmb.20718
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This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
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https://openjournals.library.sydney.edu.au/index.php/CAL/article/view/7299
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</StructureSection>
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https://www.researchgate.net/profile/Linda-Columbus/publication/280092379_Gray_BAMBED_2015_SI/links/55a81b8d08ae815a04213253/Gray-BAMBED-2015-SI.pdf
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== References ==
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<references/>
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https://faseb.onlinelibrary.wiley.com/doi/abs/10.1096/fasebj.25.1_supplement.909.1
 +
 
 +
https://iubmb.onlinelibrary.wiley.com/doi/full/10.1002/bmb.20805
 +
 
 +
https://www.sciencedirect.com/science/article/abs/pii/S0968000410000629
 +
 
 +
https://www.sciencedirect.com/science/article/abs/pii/S0022283618309884
 +
 
 +
https://pdfs.semanticscholar.org/6624/1c4f956bb26873386cda0a2e56bebec8be45.pdf
 +
 
 +
https://pubs.acs.org/doi/abs/10.1021/ed101022g
 +
 
 +
https://iubmb.onlinelibrary.wiley.com/doi/full/10.1002/bmb.20693
 +
 
 +
https://books.google.co.uk/books?hl=en&lr=&id=aQW6BQAAQBAJ&oi=fnd&pg=PR7&dq=proteopedia&ots=wUUkVg-lq0&sig=VMNqV-Gn_RLqUpdGsbBysVeGuck#v=onepage&q=proteopedia&f=false
 +
 
 +
https://www.learntechlib.org/p/48575/
 +
 
 +
https://iubmb.onlinelibrary.wiley.com/doi/full/10.1002/bmb.20769
 +
 
 +
https://iubmb.onlinelibrary.wiley.com/doi/full/10.1002/bmb.20436
 +
 
 +
https://link.springer.com/chapter/10.1007/978-3-319-03919-0_42
 +
 
 +
https://academic.oup.com/bioinformatics/article/26/17/2210/198818?login=true
 +
 
 +
https://academic.oup.com/bib/advance-article/doi/10.1093/bib/bbaa003/5735620?login=true
 +
 
 +
https://www.sciencedirect.com/science/article/abs/pii/S0022283618303693
 +
 
 +
https://arxiv.org/abs/1806.08332
 +
 
 +
https://www.lifescied.org/doi/full/10.1187/cbe.13-12-0247
 +
 
 +
https://pubs.acs.org/doi/abs/10.1021/bk-2019-1337.ch002
 +
 
 +
 
 +
More general citations
 +
 
 +
https://faseb.onlinelibrary.wiley.com/doi/abs/10.1096/fasebj.2020.34.s1.06861
 +
 
 +
https://iubmb.onlinelibrary.wiley.com/doi/full/10.1002/bmb.20445
 +
 
 +
https://febs.onlinelibrary.wiley.com/doi/full/10.1111/febs.14316
 +
 
 +
https://www.nature.com/articles/nrm2512
 +
 
 +
https://repositorium.sdum.uminho.pt/bitstream/1822/28581/1/herraez%20a_bmbed_2013%20posp.pdf
 +
 
 +
https://scripts.iucr.org/cgi-bin/paper?S0108767309099279
 +
 
 +
https://faseb.onlinelibrary.wiley.com/doi/abs/10.1096/fasebj.24.1_supplement.908.1
 +
 
 +
http://bichez.pedf.cuni.cz/archiv/article/92
 +
 
 +
https://www.tandfonline.com/doi/full/10.1080/21553769.2012.689262
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.713782
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.718526
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.759885
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.745168
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.736773
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.758056
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.712459
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.726191
 +
 
 +
https://iubmb.onlinelibrary.wiley.com/doi/full/10.1002/bmb.20793
 +
 
 +
https://scripts.iucr.org/cgi-bin/paper?rr5151
 +
 
 +
https://www.sciencedirect.com/science/article/abs/pii/S0009279719304570
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.736774
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.732340
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.712477
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.726532
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.737295
 +
 
 +
https://accessiblemeds.org/sites/default/files/2019-11/Sarah_Yim_GRxBiosims2019.pdf
 +
 
 +
https://dspace.mit.edu/handle/1721.1/121878
 +
 
 +
https://www.tandfonline.com/doi/full/10.1080/07391102.2012.762722
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.721496
 +
 
 +
https://www.sciencedirect.com/science/article/abs/pii/S0167779917303074
 +
 
 +
https://www.sciencedirect.com/science/article/abs/pii/S0009279719304508
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.732343
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.721495
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.755134
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.726529
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.712460
 +
 
 +
https://www.researchgate.net/profile/Kelley_Swanberg/publication/279515655_Enhanced_baseline_locomotor_response_to_cocaine_without_alteration_in_drug-specific_conditioned_place_preference_or_behavioral_sensitization_in_adult_male_C57Bl6_mice_subjected_to_left_parietal_contro/links/559439c708ae793d13797ffa/Enhanced-baseline-locomotor-response-to-cocaine-without-alteration-in-drug-specific-conditioned-place-preference-or-behavioral-sensitization-in-adult-male-C57Bl-6-mice-subjected-to-left-parietal-contr.pdf
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.763216
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.721497
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.712458
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.680034
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.680030
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.726530
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.721498
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.745378
 +
 
 +
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0025246
 +
 
 +
https://link.springer.com/content/pdf/10.1007/s00775-015-1319-6.pdf
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.719111
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.680028
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.713780
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.762752
 +
 
 +
https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.713781
 +
 
 +
https://books.google.co.uk/books?hl=en&lr=&id=yV61DwAAQBAJ&oi=fnd&pg=PP1&dq=proteopedia&ots=dOYoMOMeX6&sig=cEn0ICj6eDWxai4l1sl5m2xv5Io
 +
 
 +
https://pubs.acs.org/doi/abs/10.1021/acs.jchemed.8b00426
 +
 
 +
https://pubs.acs.org/doi/abs/10.1021/bk-2011-1087.ch004

Revision as of 20:39, 20 February 2021

Proteopedia annotated bibliography

https://www.learntechlib.org/p/35558/

https://online.ucpress.edu/abt/article/74/4/278/18418/Unfolding-Proteins

https://sciencecases.lib.buffalo.edu/cs/files/ricin.pdf

https://faseb.onlinelibrary.wiley.com/doi/abs/10.1096/fasebj.25.1_supplement.575.1

https://faseb.onlinelibrary.wiley.com/doi/abs/10.1096/fasebj.24.1_supplement.16.1

https://iubmb.onlinelibrary.wiley.com/doi/full/10.1002/bmb.20718

https://openjournals.library.sydney.edu.au/index.php/CAL/article/view/7299

https://www.researchgate.net/profile/Linda-Columbus/publication/280092379_Gray_BAMBED_2015_SI/links/55a81b8d08ae815a04213253/Gray-BAMBED-2015-SI.pdf

https://faseb.onlinelibrary.wiley.com/doi/abs/10.1096/fasebj.25.1_supplement.909.1

https://iubmb.onlinelibrary.wiley.com/doi/full/10.1002/bmb.20805

https://www.sciencedirect.com/science/article/abs/pii/S0968000410000629

https://www.sciencedirect.com/science/article/abs/pii/S0022283618309884

https://pdfs.semanticscholar.org/6624/1c4f956bb26873386cda0a2e56bebec8be45.pdf

https://pubs.acs.org/doi/abs/10.1021/ed101022g

https://iubmb.onlinelibrary.wiley.com/doi/full/10.1002/bmb.20693

https://books.google.co.uk/books?hl=en&lr=&id=aQW6BQAAQBAJ&oi=fnd&pg=PR7&dq=proteopedia&ots=wUUkVg-lq0&sig=VMNqV-Gn_RLqUpdGsbBysVeGuck#v=onepage&q=proteopedia&f=false

https://www.learntechlib.org/p/48575/

https://iubmb.onlinelibrary.wiley.com/doi/full/10.1002/bmb.20769

https://iubmb.onlinelibrary.wiley.com/doi/full/10.1002/bmb.20436

https://link.springer.com/chapter/10.1007/978-3-319-03919-0_42

https://academic.oup.com/bioinformatics/article/26/17/2210/198818?login=true

https://academic.oup.com/bib/advance-article/doi/10.1093/bib/bbaa003/5735620?login=true

https://www.sciencedirect.com/science/article/abs/pii/S0022283618303693

https://arxiv.org/abs/1806.08332

https://www.lifescied.org/doi/full/10.1187/cbe.13-12-0247

https://pubs.acs.org/doi/abs/10.1021/bk-2019-1337.ch002


More general citations

https://faseb.onlinelibrary.wiley.com/doi/abs/10.1096/fasebj.2020.34.s1.06861

https://iubmb.onlinelibrary.wiley.com/doi/full/10.1002/bmb.20445

https://febs.onlinelibrary.wiley.com/doi/full/10.1111/febs.14316

https://www.nature.com/articles/nrm2512

https://repositorium.sdum.uminho.pt/bitstream/1822/28581/1/herraez%20a_bmbed_2013%20posp.pdf

https://scripts.iucr.org/cgi-bin/paper?S0108767309099279

https://faseb.onlinelibrary.wiley.com/doi/abs/10.1096/fasebj.24.1_supplement.908.1

http://bichez.pedf.cuni.cz/archiv/article/92

https://www.tandfonline.com/doi/full/10.1080/21553769.2012.689262

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.713782

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.718526

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.759885

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.745168

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.736773

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.758056

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.712459

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.726191

https://iubmb.onlinelibrary.wiley.com/doi/full/10.1002/bmb.20793

https://scripts.iucr.org/cgi-bin/paper?rr5151

https://www.sciencedirect.com/science/article/abs/pii/S0009279719304570

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.736774

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.732340

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.712477

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.726532

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.737295

https://accessiblemeds.org/sites/default/files/2019-11/Sarah_Yim_GRxBiosims2019.pdf

https://dspace.mit.edu/handle/1721.1/121878

https://www.tandfonline.com/doi/full/10.1080/07391102.2012.762722

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.721496

https://www.sciencedirect.com/science/article/abs/pii/S0167779917303074

https://www.sciencedirect.com/science/article/abs/pii/S0009279719304508

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.732343

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.721495

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.755134

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.726529

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.712460

https://www.researchgate.net/profile/Kelley_Swanberg/publication/279515655_Enhanced_baseline_locomotor_response_to_cocaine_without_alteration_in_drug-specific_conditioned_place_preference_or_behavioral_sensitization_in_adult_male_C57Bl6_mice_subjected_to_left_parietal_contro/links/559439c708ae793d13797ffa/Enhanced-baseline-locomotor-response-to-cocaine-without-alteration-in-drug-specific-conditioned-place-preference-or-behavioral-sensitization-in-adult-male-C57Bl-6-mice-subjected-to-left-parietal-contr.pdf

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.763216

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.721497

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.712458

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.680034

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.680030

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.726530

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.721498

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.745378

https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0025246

https://link.springer.com/content/pdf/10.1007/s00775-015-1319-6.pdf

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.719111

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.680028

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.713780

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.762752

https://www.tandfonline.com/doi/abs/10.1080/07391102.2012.713781

https://books.google.co.uk/books?hl=en&lr=&id=yV61DwAAQBAJ&oi=fnd&pg=PP1&dq=proteopedia&ots=dOYoMOMeX6&sig=cEn0ICj6eDWxai4l1sl5m2xv5Io

https://pubs.acs.org/doi/abs/10.1021/acs.jchemed.8b00426

https://pubs.acs.org/doi/abs/10.1021/bk-2011-1087.ch004

Proteopedia Page Contributors and Editors (what is this?)

Karsten Theis

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