Sandbox Reserved 1700
From Proteopedia
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== GPCR Structure == | == GPCR Structure == | ||
| - | + | Cryo-electron microscopy (cryo-EM) was used to image the MRGPRX2 receptor to analyze its structure. <ref name= "Cao" /> <ref name= "Yang" /> which helped to classify it into the A family of GPCR's. MRGPRX2 therefore shares the same general structural domains of all GPCR's. This includes a <scene name='90/904305/Structure_overview_red/1'>transmembrane domain</scene> and a <scene name='90/904305/Structure_overview_gprotein/1'>G-protein</scene> domain. The G-protein domain consists of <scene name='90/904305/Structure_overview_alpha/1'>alpha</scene>, <scene name='90/904305/Structure_overview_beta/1'>beta</scene>, and <scene name='90/904305/Structure_overview_gamma/1'>gamma</scene> subunits. | |
=== Transmembrane Domain === | === Transmembrane Domain === | ||
| + | The transmembrane domain spans the cellular membrane. It consists of seven transmembrane helices, three extracellular loops, and three intracellular loops. The transmembrane helices are numbered 1-7 and contain special conserved motifs that are shared across other A family receptors. These motifs are expanded upon later, as they heavily contribute to the structure and therefore function of the transmembrane domain as a whole. | ||
| + | The extracellular domain of the protein is responsible for ligand binding, which initiates signal transduction. The properties of the extracellular environment of the transmembrane domain determines what ligands bind to the protein, and what type of binding interactions the protein and ligand have. In MRGPRX2, the extracellular side of the protein has two binding pockets. Binding pocket one is positively charged due to positively charged lysine residues, while binding pocket two contains hydrophobic amino acids, which contribute to hydrophobic interactions between ligand and protein. | ||
| + | The intracellular domain is what connects the transmembrane and G-protein domains together. There are a wide variety of residues and important interactions that contribute to this interaction, and it is very important in transmitting the extracellular signal of ligand binding, to the intracellular environment where the G-protein binds and can become activated. | ||
=== G-Protein === | === G-Protein === | ||
Revision as of 20:27, 26 March 2022
| This Sandbox is Reserved from February 28 through September 1, 2022 for use in the course CH462 Biochemistry II taught by R. Jeremy Johnson at the Butler University, Indianapolis, USA. This reservation includes Sandbox Reserved 1700 through Sandbox Reserved 1729. |
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MRGPRX2 Human Itch G-Protein Coupled Receptor (GPCR)
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