6e1x

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:17, 11 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6e1x' size='340' side='right'caption='[[6e1x]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
<StructureSection load='6e1x' size='340' side='right'caption='[[6e1x]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6e1x]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6E1X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6E1X FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6e1x]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6E1X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6E1X FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HLG:N-{3-[(4-aminobutyl)amino]propyl}acetamide'>HLG</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=SP5:N-[3-({4-[(3-AMINOPROPYL)AMINO]BUTYL}AMINO)PROPYL]ACETAMIDE'>SP5</scene>, <scene name='pdbligand=SPM:SPERMINE'>SPM</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Diamine_N-acetyltransferase Diamine N-acetyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.57 2.3.1.57] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HLG:N-{3-[(4-aminobutyl)amino]propyl}acetamide'>HLG</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=SP5:N-[3-({4-[(3-AMINOPROPYL)AMINO]BUTYL}AMINO)PROPYL]ACETAMIDE'>SP5</scene>, <scene name='pdbligand=SPM:SPERMINE'>SPM</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6e1x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6e1x OCA], [http://pdbe.org/6e1x PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6e1x RCSB], [http://www.ebi.ac.uk/pdbsum/6e1x PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6e1x ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6e1x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6e1x OCA], [https://pdbe.org/6e1x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6e1x RCSB], [https://www.ebi.ac.uk/pdbsum/6e1x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6e1x ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/ATDA_VIBCH ATDA_VIBCH]] Involved in the protection against polyamine toxicity by regulating their concentration. Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to the primary amino groups of spermidine to yield N(1)- and N(8)-acetylspermidine. It can use polyamines such as spermine and N(1)-acetylspermine, but not putrescine or cadaverine.<ref>PMID:23184347</ref> <ref>PMID:25623305</ref>
+
[https://www.uniprot.org/uniprot/ATDA_VIBCH ATDA_VIBCH] Involved in the protection against polyamine toxicity by regulating their concentration. Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to the primary amino groups of spermidine to yield N(1)- and N(8)-acetylspermidine. It can use polyamines such as spermine and N(1)-acetylspermine, but not putrescine or cadaverine.<ref>PMID:23184347</ref> <ref>PMID:25623305</ref>
 +
 
 +
==See Also==
 +
*[[Spermidine/spermine N-acetyltransferase|Spermidine/spermine N-acetyltransferase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Diamine N-acetyltransferase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Anderson, W F]]
+
[[Category: Vibrio cholerae O1 biovar El Tor str. N16961]]
-
[[Category: Structural genomic]]
+
[[Category: Anderson WF]]
-
[[Category: Filippova, E V]]
+
[[Category: Filippova EV]]
-
[[Category: Joachimiak, A]]
+
[[Category: Joachimiak A]]
-
[[Category: Kiryukhina, O]]
+
[[Category: Kiryukhina O]]
-
[[Category: Minasov, G]]
+
[[Category: Minasov G]]
-
[[Category: Satchell, K J.F]]
+
[[Category: Satchell KJF]]
-
[[Category: Csgid]]
+
-
[[Category: Gnat]]
+
-
[[Category: N-acetyltransferase]]
+
-
[[Category: Polyamine]]
+
-
[[Category: Speg]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of product-bound complex of spermidine/spermine N-acetyltransferase SpeG

PDB ID 6e1x

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools