5mux

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:50, 8 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5mux' size='340' side='right'caption='[[5mux]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='5mux' size='340' side='right'caption='[[5mux]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5mux]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacsu Bacsu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MUX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MUX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5mux]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MUX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MUX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">prpD, mmgE, yqiP, BSU24130 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224308 BACSU])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5mux FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mux OCA], [http://pdbe.org/5mux PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mux RCSB], [http://www.ebi.ac.uk/pdbsum/5mux PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mux ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5mux FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mux OCA], [https://pdbe.org/5mux PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5mux RCSB], [https://www.ebi.ac.uk/pdbsum/5mux PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5mux ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PRPD_BACSU PRPD_BACSU]] Involved in the catabolism of short chain fatty acids (SCFA) via the tricarboxylic acid (TCA)(acetyl degradation route) and via the 2-methylcitrate cycle I (propionate degradation route). Catalyzes the stereospecific dehydration of (2S,3S)-2-methylcitrate (2-MC) to yield the cis isomer of 2-methyl-aconitate. Could also catalyze the dehydration of citrate and the hydration of cis-aconitate.[UniProtKB:P77243]
+
[https://www.uniprot.org/uniprot/MMGE_BACSU MMGE_BACSU] Involved in both the tricarboxylic acid (TCA) and methylcitric acid cycles (PubMed:28956599). Has both 2-methylcitrate dehydratase and citrate dehydratase activities. Catalyzes the dehydration of 2-methylcitrate (2-MC) to yield 2-methyl-cis-aconitate, and the dehydration of citrate to yield cis-aconitate. Cannot form isocitrate. Uses either (2S,3R)- or (2R,3S)-2-methylcitrate (PubMed:28956599).<ref>PMID:28956599</ref>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacsu]]
+
[[Category: Bacillus subtilis subsp. subtilis str. 168]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Baker, G E]]
+
[[Category: Baker GE]]
-
[[Category: Race, P R]]
+
[[Category: Race PR]]
-
[[Category: Dehydratase]]
+
-
[[Category: Lyase]]
+

Current revision

Crystal structure of 2-methylcitrate dehydratase (MmgE) from Bacillus subtilis.

PDB ID 5mux

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools