8iju

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:26, 24 January 2024) (edit) (undo)
 
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 8iju is ON HOLD until 2025-02-28
+
==ATP-dependent RNA helicase DDX39A (URH49delta41)==
 +
<StructureSection load='8iju' size='340' side='right'caption='[[8iju]], [[Resolution|resolution]] 1.82&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[8iju]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8IJU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8IJU FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.82&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8iju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8iju OCA], [https://pdbe.org/8iju PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8iju RCSB], [https://www.ebi.ac.uk/pdbsum/8iju PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8iju ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/DX39A_HUMAN DX39A_HUMAN] Involved in pre-mRNA splicing. Required for the export of mRNA out of the nucleus.<ref>PMID:15047853</ref> <ref>PMID:17548965</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
mRNA export is an essential pathway for the regulation of gene expression. In humans, closely related RNA helicases, UAP56 and URH49, shape selective mRNA export pathways through the formation of distinct complexes, known as apo-TREX and apo-AREX complexes, and their subsequent remodeling into similar ATP-bound complexes. Therefore, defining the unidentified components of the apo-AREX complex and elucidating the molecular mechanisms underlying the formation of distinct apo-complexes is key to understanding their functional divergence. In this study, we identify additional apo-AREX components physically and functionally associated with URH49. Furthermore, by comparing the structures of UAP56 and URH49 and performing an integrated analysis of their chimeric mutants, we exhibit unique structural features that would contribute to the formation of their respective complexes. This study provides insights into the specific structural and functional diversification of these two helicases that diverged from the common ancestral gene Sub2.
-
Authors: Mikami, B., Fujita, K., Masuda, S., Kojima, M.
+
Structural differences between the closely related RNA helicases, UAP56 and URH49, fashion distinct functional apo-complexes.,Fujita KI, Ito M, Irie M, Harada K, Fujiwara N, Ikeda Y, Yoshioka H, Yamazaki T, Kojima M, Mikami B, Mayeda A, Masuda S Nat Commun. 2024 Jan 15;15(1):455. doi: 10.1038/s41467-023-44217-8. PMID:38225262<ref>PMID:38225262</ref>
-
Description: ATP-dependent RNA helicase DDX39A (URH49delta41)
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Masuda, S]]
+
<div class="pdbe-citations 8iju" style="background-color:#fffaf0;"></div>
-
[[Category: Fujita, K]]
+
== References ==
-
[[Category: Kojima, M]]
+
<references/>
-
[[Category: Mikami, B]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Homo sapiens]]
 +
[[Category: Large Structures]]
 +
[[Category: Fujita K]]
 +
[[Category: Kojima M]]
 +
[[Category: Masuda S]]
 +
[[Category: Mikami B]]

Current revision

ATP-dependent RNA helicase DDX39A (URH49delta41)

PDB ID 8iju

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools