User:Preston Roa/Sandbox 1

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=== Active Site/Binding Site ===
=== Active Site/Binding Site ===
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The transmembrane core is key to the active site/binding site. One of the main interactions between GLP-1 and GLP-1R includes the hydrogen bond between H7 and Q234 as the N-terminus of the peptide is bound to the transmembrane domain of the receptor. This interaction provides the most stability within the structure. <scene name='10/1037514/Histidine_7/7'>Histidine 7 Interaction</scene> It is further enhanced by hydrophobic interactions between residues V16 and F12 of the peptide and L384 and L141 of the receptor. Notably there is a hydrogen bond T13 of the peptide and K197 of the receptor. <scene name='10/1037514/Other_n-terminus_interactions/4'>Hydrophobic and Hydrogen Bonding in N-Terminus</scene> <scene name='10/1037513/Glp_bound_to_glp-1r_h_bonds/4'>GLP-1 bound to GLP-1R H-bonds</scene> <scene name='10/1037513/Glp_bound_to_glp-1r_no_clash/3'>GLP-1 bound to GLP-1R: interactions, no steric clash</scene>
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The transmembrane core is key to the active site/binding site. One of the main interactions between GLP-1 and GLP-1R includes the hydrogen bond between H7 and Q234 as the N-terminus of the peptide is bound to the transmembrane domain of the receptor. This interaction provides the most stability within the structure. <scene name='10/1037514/Histidine_7/7'>Histidine 7 Interaction</scene> It is further enhanced by hydrophobic interactions between residues V16 and F12 of the peptide and L384 and L141 of the receptor <scene name='10/1037514/Other_n-terminus_interactions/4'>Hydrophobic and Hydrogen Bonding in N-Terminus</scene>. Notably there is a hydrogen bond T13 of the peptide and K197 of the receptor. There is also a stabilizing hydrogen bond between S17 and E21 of GLP to R299 of the GLP-1R which anchors the GLP-1 peptide to the binding site of the receptor <scene name='10/1037513/Glp_bound_to_glp-1r_h_bonds/4'>GLP-1 bound to GLP-1R H-bonds</scene>.
=== Intracellular Domain ===
=== Intracellular Domain ===

Revision as of 22:19, 29 April 2024

GLP-1

GLP-1 6X18

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References

[1] Drucker DJ, Habener JF, Holst JJ. Discovery, characterization, and clinical development of the glucagon-like peptides. J Clin Invest. 2017 Dec 1;127(12):4217-4227. doi: 10.1172/JCI97233. Epub 2017 Dec 1. PMID: 29202475; PMCID: PMC5707151.

[2] Mayendraraj, A., Rosenkilde, M. M., & Gasbjerg, L. S. (2022). GLP-1 and GIP receptor signaling in beta cells - A review of receptor interactions and co-stimulation. Peptides, 151, 170749. https://doi.org/10.1016/j.peptides.2022.170749

[3] Seino, Y., Fukushima, M., & Yabe, D. (2010). GIP and GLP-1, the two incretin hormones: Similarities and differences. Journal of diabetes investigation, 1(1-2), 8–23. https://doi.org/10.1111/j.2040-1124.2010.00022.x

Student Contributors

  • Preston Roa
  • Jack Guckien
  • Sam Reichenbach

Proteopedia Page Contributors and Editors (what is this?)

Preston Roa

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