ICn3D
From Proteopedia
(Difference between revisions)
(New page: [https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d.html iCn3D], "I see in 3D", is a powerful macromolecular structure viewer provided by the [https://www.ncbi.nlm.nih.gov/ US National Cen...) |
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| - | [https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d.html iCn3D], "I see in 3D", is a powerful macromolecular structure viewer provided by the [https://www.ncbi.nlm.nih.gov/ US National Center for Biotechnology Information]. It works within a web browser. It has extensive menus, as well as a command language. To start the program, go to [https://www.ncbi.nlm.nih.gov/Structure/icn3d]. | + | [https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d.html iCn3D], "I see in 3D", is a powerful macromolecular structure viewer provided by the [https://www.ncbi.nlm.nih.gov/ US National Center for Biotechnology Information]. It works within a web browser. It has extensive menus, as well as a command language. To start the program, go to the [https://www.ncbi.nlm.nih.gov/Structure/icn3d iCn3D Website]. |
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| + | Commands can be entered within a session, or appended to a URL web address so as to customize an initial view. For example, here is a [https://www.ncbi.nlm.nih.gov/Structure/icn3d/?mmdbid=1PGB&bu=0&command=select%20sets%20proteins;%20set%20delphi%20surface%20|%20contour%202%20|%20gsize%2065%20|%20salt%200.15%20|%20surface%2022%20|%20opacity%201.0%20|%20wireframe%20no; link including commands] that shows an [[Electrostatic potential map]] of protein [[1pgb]]. | ||
iCn3D was preceded by a standalone program Cn3D, which is being phased out after its [https://www.ncbi.nlm.nih.gov/Structure/CN3D/cn3d.shtml last update in March, 2023]. | iCn3D was preceded by a standalone program Cn3D, which is being phased out after its [https://www.ncbi.nlm.nih.gov/Structure/CN3D/cn3d.shtml last update in March, 2023]. | ||
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| + | ==See Also== | ||
| + | *[[Molecular modeling and visualization software]] | ||
Revision as of 17:56, 25 August 2024
iCn3D, "I see in 3D", is a powerful macromolecular structure viewer provided by the US National Center for Biotechnology Information. It works within a web browser. It has extensive menus, as well as a command language. To start the program, go to the iCn3D Website.
Commands can be entered within a session, or appended to a URL web address so as to customize an initial view. For example, here is a link including commands that shows an Electrostatic potential map of protein 1pgb.
iCn3D was preceded by a standalone program Cn3D, which is being phased out after its last update in March, 2023.
