User:Letícia Oliveira Rojas Cruz/Sandbox 1
From Proteopedia
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==Introduction== | ==Introduction== | ||
<StructureSection load='6m17' size='330' side='right' caption='Caption for this structure' scene=''> | <StructureSection load='6m17' size='330' side='right' caption='Caption for this structure' scene=''> | ||
- | <scene name='10/1083732/Ace2_completa/ | + | <scene name='10/1083732/Ace2_completa/3'>Angiotensin-converting enzyme 2 (ACE2)</scene> is an important protein expressed in several human tissues, such as the heart and kidneys. It plays a key role in the Renin-Angiotensin System - "RAS" - by catalyzing the conversion of angiotensin II (Ang II), promoting blood pressure regulation. |
- | Another function of ACE2 is related to SARS-CoV-2 infection, the virus responsible for the COVID-19 pandemic. In this context, ACE2 serves as the entry receptor for the virus | + | Another function of ACE2 is related to SARS-CoV-2 infection, the virus responsible for the COVID-19 pandemic. In this context, ACE2 serves as the entry receptor for the virus. |
== Structure information == | == Structure information == | ||
- | The ACE2 protein gene has 40 kb and 18 exons. Its protein has 805 amino acids with a molecular weight of 120 kDa. Here, we have a view of the <scene name='10/1083732/Ace2_completa/ | + | The ACE2 protein gene has 40 kb and 18 exons. Its protein has 805 amino acids with a molecular weight of approximately 120 kDa. Here, we have a view of the <scene name='10/1083732/Ace2_completa/3'>full ACE2 protein</scene>, going from the '''{{Font color|blue|N-terminal}}''' to '''{{Font color|red|C-terminal}}''' region. Some other ways to represent the ACE2 protein include showing its <scene name='10/1083732/Ace2_alpha_e_beta/1'>secondary structure elements</scene>, such as '''{{Font color|deeppink|alpha helices}}''' and '''{{Font color|gold|beta sheets}}''', and mapping the '''polarity''' of its residues, differentiating <scene name='10/1083732/Ace2_completa_hydroph/1'>hydrophobic</scene> and <scene name='10/1083732/Ace2_completa_polar/1'>polar</scene> areas across its surface. |
- | The '''<scene name='10/1083732/Peptidase_domain/ | + | Besides its general aspects, the ACE2 protein can be divided into 4 portions: Peptidase Domain (Residues 19–615), Collectrin-like Domain (Residues 616–740), Transmembrane Domain (Residues 741–761) and Intracellular C-terminal Tail (Residues 762–805). |
+ | |||
+ | The '''<scene name='10/1083732/Peptidase_domain/2'>Peptidase Domain</scene>''' is responsible for the enzymatic activity of ACE2. This domain can be divided in two subdomains: <scene name='10/1083732/Subdominio_1_nterm/2'>Subdomain I</scene> (residues 19–400) and <scene name='10/1083732/Subdominio_2_cterm/2'>Subdomain II</scene> (residues 401–615). Together, they form a substrate-binding cleft, where is located the '''<scene name='10/1083732/Sitio_zinco_com_residuos/1'>catalytic site</scene>''', denominated '''HEXXH+E zinc-binding motif'''. Within this site, a '''{{Font color|lime|zinc-ion}}''' is associated with the residues '''His374''', '''His378''', and '''Glu402''', which are going to perform a nucleophilic attack on the peptide bond of the substrate, leading to its cleavage. '''<scene name='10/1083732/Peptidase_domain_hydrofobic/2'>Hydrophobic portions</scene>''' within each subdomain, composed mainly of nonpolar residues provide tertiary structural stability, maintaining the correct spatial arrangement of catalytic residues. In the animation, we can observe a concentration of the '''{{Font color|gray|hydrophobic residues}}''' towards the center of the molecule, while the '''{{Font color|orchid|polar}}''' ones are towards the outside part of the molecule. | ||
The following domain is the '''<scene name='10/1083732/Collectrin-like_domain/3'>Collectrin-like Domain</scene>''', formed by '''{{Font color|gold|4 beta sheets}}''' and '''{{Font color|deeppink|3 alpha-helices}}''' that make a hydrophobic core, structure that is important for stabilizing ACE2 dimers, which will be represented later on this page. | The following domain is the '''<scene name='10/1083732/Collectrin-like_domain/3'>Collectrin-like Domain</scene>''', formed by '''{{Font color|gold|4 beta sheets}}''' and '''{{Font color|deeppink|3 alpha-helices}}''' that make a hydrophobic core, structure that is important for stabilizing ACE2 dimers, which will be represented later on this page. | ||
The <scene name='10/1083732/Transmembrane_domain/1'>Transmembrane Domain</scene> is composed of a '''{{Font color|red|single alpha helix}}''', made of a majority of <scene name='10/1083732/Transmembrane_domain_hydrop/1'>hydrophobic residues</scene> (in '''{{Font color|gray|gray}}'''). This characteristic allows ACE2 to be anchored in the plasma membrane, due to its hydrophobic nature. | The <scene name='10/1083732/Transmembrane_domain/1'>Transmembrane Domain</scene> is composed of a '''{{Font color|red|single alpha helix}}''', made of a majority of <scene name='10/1083732/Transmembrane_domain_hydrop/1'>hydrophobic residues</scene> (in '''{{Font color|gray|gray}}'''). This characteristic allows ACE2 to be anchored in the plasma membrane, due to its hydrophobic nature. | ||
+ | |||
+ | The final domain is the Intracellular C-terminal Tail but its function remains uncertain. | ||
Revision as of 16:48, 22 June 2025
Introduction
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