Believe It or Not!
From Proteopedia
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'''The most popular ...''' | '''The most popular ...''' | ||
| + | * The most popular Sources are [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=9606 Homo sapiens], present in 14,235 structures and [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=562 Escherichia coli], present in 6,554 structures. | ||
* The most popular Ligand is '''SO4''', present in 5,876 PDB structures. | * The most popular Ligand is '''SO4''', present in 5,876 PDB structures. | ||
* The most popular Space group is '''P 21 21 21''', present in 10,292 PDB structures. | * The most popular Space group is '''P 21 21 21''', present in 10,292 PDB structures. | ||
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* The PDB structure with the most models is [[2hyn]], with 184 models. | * The PDB structure with the most models is [[2hyn]], with 184 models. | ||
* The PDB structure with the most related structures is [[2j9n]] with 257 related structures. | * The PDB structure with the most related structures is [[2j9n]] with 257 related structures. | ||
| - | * The PDB structure with the longest chain is [[1s1i]] with 2,999 | + | * The PDB structure with the longest chain is [[1s1i]] with 2,999 amino acids. |
* The PDB structures with the shortest chain (greater than one aa) are [[1a16]], [[1abw]], [[1af0]], [[1ahg]], [[1apg]], [[1atl]], [[1b2m]], [[1cwp]], [[1d53]], [[1ddl]], [[1dn8]], [[1dpp]], [[1ehl]], [[1f0v]], [[1hsb]], [[1htt]], [[1i8m]], [[1ijs]], [[1kqs]], [[1lgc]], [[1lna]], [[1lnb]], [[1lnc]], [[1lnd]], [[1lne]], [[1lnf]], [[1m6a]], [[1mcl]], [[1mcn]], [[1mcq]], [[1mcr]], [[1n38]], [[1oup]], [[1pek]], [[1pin]], [[1pv4]], [[1pvo]], [[1q81]], [[1q82]], [[1rhq]], [[1rnb]], [[1tlx]], [[1uvk]], [[1xam]], [[279d]], [[2aig]], [[2bn2]], [[2cyh]], [[2dwl]], [[2dwm]], [[2dwn]], [[2ht1]], [[2htt]], [[2ok0]], [[2pjr]], [[2rkm]], [[2tlx]], [[2tpi]], [[2vrt]], [[3bfn]], [[3cpa]], [[3cyh]], [[3rec]], [[3tmn]], [[3tpi]], [[4cyh]], [[4pad]], [[4tpi]], [[5cyh]], [[8tln]] with 2 amino acids each. | * The PDB structures with the shortest chain (greater than one aa) are [[1a16]], [[1abw]], [[1af0]], [[1ahg]], [[1apg]], [[1atl]], [[1b2m]], [[1cwp]], [[1d53]], [[1ddl]], [[1dn8]], [[1dpp]], [[1ehl]], [[1f0v]], [[1hsb]], [[1htt]], [[1i8m]], [[1ijs]], [[1kqs]], [[1lgc]], [[1lna]], [[1lnb]], [[1lnc]], [[1lnd]], [[1lne]], [[1lnf]], [[1m6a]], [[1mcl]], [[1mcn]], [[1mcq]], [[1mcr]], [[1n38]], [[1oup]], [[1pek]], [[1pin]], [[1pv4]], [[1pvo]], [[1q81]], [[1q82]], [[1rhq]], [[1rnb]], [[1tlx]], [[1uvk]], [[1xam]], [[279d]], [[2aig]], [[2bn2]], [[2cyh]], [[2dwl]], [[2dwm]], [[2dwn]], [[2ht1]], [[2htt]], [[2ok0]], [[2pjr]], [[2rkm]], [[2tlx]], [[2tpi]], [[2vrt]], [[3bfn]], [[3cpa]], [[3cyh]], [[3rec]], [[3tmn]], [[3tpi]], [[4cyh]], [[4pad]], [[4tpi]], [[5cyh]], [[8tln]] with 2 amino acids each. | ||
* The PDB structures with the heaviest chain are [[2uva]], [[2uvc]] with 229,648.54 each. | * The PDB structures with the heaviest chain are [[2uva]], [[2uvc]] with 229,648.54 each. | ||
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* The PDB structure with the largest file is [[1htq]] with 19.04M . | * The PDB structure with the largest file is [[1htq]] with 19.04M . | ||
* The PDB structure with the smallest file is [[3rec]] with 2.54K . | * The PDB structure with the smallest file is [[3rec]] with 2.54K . | ||
| - | * The PDB structure with the fewest atoms might be [[1tn1]] with 3 atoms. | ||
'''Overall Statistics ...''' | '''Overall Statistics ...''' | ||
* The mean PDB resolution is 2.14 ± 0.55 based on 44,550 X_Ray structures. | * The mean PDB resolution is 2.14 ± 0.55 based on 44,550 X_Ray structures. | ||
* The mean PDB file is 155.49K ± 243.66K based on 52,263 files. | * The mean PDB file is 155.49K ± 243.66K based on 52,263 files. | ||
| - | ''Updated by [http://oca.weizmann.ac.il/oca OCA ] on Thu Aug 7 | + | ''Updated by [http://oca.weizmann.ac.il/oca OCA ] on Thu Aug 7 23:21:02 2008'' |
==Notes== | ==Notes== | ||
Search for this page with the word '''BelieveItOrNot''' -- all the words in the real title "Believe It Or Not!" are so common that they are ignored by the search index mechanism (see [[Help:Stop Words]]), so you will not succeed searching for the real title. This page is also linked to the [[Main Page]]. | Search for this page with the word '''BelieveItOrNot''' -- all the words in the real title "Believe It Or Not!" are so common that they are ignored by the search index mechanism (see [[Help:Stop Words]]), so you will not succeed searching for the real title. This page is also linked to the [[Main Page]]. | ||
Revision as of 20:21, 7 August 2008
A list of Useful, Useless or simply Interesting facts on Proteins, Structures and what's around them, automatically updated by OCA, the browser and database for structure and function.
The most popular ...
- The most popular Sources are Homo sapiens, present in 14,235 structures and Escherichia coli, present in 6,554 structures.
- The most popular Ligand is SO4, present in 5,876 PDB structures.
- The most popular Space group is P 21 21 21, present in 10,292 PDB structures.
The most conspicuous ...
- The PDB structure with the best resolution is 1ejg, with 0.54 Å.
- The PDB structure with the worst resolution is 2tma, with 15.00 Å.
- The PDB structure with the shortest life is 1sv7 with 16 days.
- The PDB structure with the most models is 2hyn, with 184 models.
- The PDB structure with the most related structures is 2j9n with 257 related structures.
- The PDB structure with the longest chain is 1s1i with 2,999 amino acids.
- The PDB structures with the shortest chain (greater than one aa) are 1a16, 1abw, 1af0, 1ahg, 1apg, 1atl, 1b2m, 1cwp, 1d53, 1ddl, 1dn8, 1dpp, 1ehl, 1f0v, 1hsb, 1htt, 1i8m, 1ijs, 1kqs, 1lgc, 1lna, 1lnb, 1lnc, 1lnd, 1lne, 1lnf, 1m6a, 1mcl, 1mcn, 1mcq, 1mcr, 1n38, 1oup, 1pek, 1pin, 1pv4, 1pvo, 1q81, 1q82, 1rhq, 1rnb, 1tlx, 1uvk, 1xam, 279d, 2aig, 2bn2, 2cyh, 2dwl, 2dwm, 2dwn, 2ht1, 2htt, 2ok0, 2pjr, 2rkm, 2tlx, 2tpi, 2vrt, 3bfn, 3cpa, 3cyh, 3rec, 3tmn, 3tpi, 4cyh, 4pad, 4tpi, 5cyh, 8tln with 2 amino acids each.
- The PDB structures with the heaviest chain are 2uva, 2uvc with 229,648.54 each.
- The PDB structure with the most ligands is 2axt with 15 ligands.
- The PDB structure with the largest file is 1htq with 19.04M .
- The PDB structure with the smallest file is 3rec with 2.54K .
Overall Statistics ...
- The mean PDB resolution is 2.14 ± 0.55 based on 44,550 X_Ray structures.
- The mean PDB file is 155.49K ± 243.66K based on 52,263 files.
Updated by OCA on Thu Aug 7 23:21:02 2008
Notes
Search for this page with the word BelieveItOrNot -- all the words in the real title "Believe It Or Not!" are so common that they are ignored by the search index mechanism (see Help:Stop Words), so you will not succeed searching for the real title. This page is also linked to the Main Page.
See Also
- Atomic coordinate file
- Ligands
- NMR Ensembles of Models
- Protein Data Bank
- Resolution
- Standard Residues
