User:Michael Strong/H1N1/NS1/MSA
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(New page: == H1N1 Swine Flu Multiple Sequence Alignment of NS1 Protein, 53 sequences== {| class="wikitable" |Protein |Polymorphism |Strain with Polymorphism |Number of Strains with Polymorphism |--...)
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Revision as of 18:21, 15 May 2009
H1N1 Swine Flu Multiple Sequence Alignment of NS1 Protein, 53 sequences
| Protein | Polymorphism | Strain with Polymorphism | Number of Strains with Polymorphism |
| NS1 | D12E | 229536107_A/Nebraska/02/200 | 1 |
| NS1 | F32L | 229535811_A/Texas/09/2009 | 1 |
| NS1 | G45R | 229598886_A/Texas/15/2009 | 1 |
| NS1 | R88C | 229536033_A/Minnesota/02/20 | 1 |
| NS1 | E97G | 229892754_A/Canada-NS/RV153 | 1 |
| NS1 | M104T | 237624336_A/swine/Alberta/O | 1 |
| NS1 | I123V | 229892764_A/Canada-AB/RV153 | 15 |
| NS1 | F134I | 237624336_A/swine/Alberta/O | 1 |
gi|229598886_A/Texas/15/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKRRGNTL 50
gi|229892754_A/Canada-NS/RV153 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229536033_A/Minnesota/02/20 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229536107_A/Nebraska/02/200 MDSNTMSSFQVECFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229535811_A/Texas/09/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPLLDRLRRDQKSLKGRGNTL 50
gi|229396500_A/Ohio/07/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396477_A/New_York/19/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396402_A/New_York/31/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396413_A/New_York/23/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396387_A/New_York/18/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396449_A/New_York/15/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396351_A/New_York/12/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396373_A/New_York/11/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396433_A/New_York/10/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396363_A/New_York/06/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229484061_A/Canada-ON/RV152 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229535829_A/California/14/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229892761_A/Canada-ON/RV152 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229892770_A/Canada-ON/RV152 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229892764_A/Canada-AB/RV153 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237511869_A/Mexico/4108/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237511872_A/Mexico/4115/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237511860_A/Mexico/4486/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237511866_A/Mexico/4603/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237511857_A/Mexico/4604/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229892767_A/Canada-NS/RV153 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229892758_A/Mexico/InDRE411 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229783375_A/Korea/01/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229783386_A/New_York/1669/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229783407_A/New_York/1682/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229536016_A/Arizona/01/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229536115_A/Michigan/02/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229535991_A/South_Carolina/ MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229462691_A/Castilla-La MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229462727_A/Castilla-La MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229462715_A/Pais_Vasco/GP20 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229462703_A/Valencia/GP4/20 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229484054_A/Canada-NS/RV153 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229484058_A/Mexico/InDRE448 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229368684_A/Denmark/513/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396460_A/Texas/06/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229536007_A/Kansas/03/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227977123_A/California/08/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227977155_A/California/08/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227809839_A/California/04/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227977111_A/California/04/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|228017753_A/California/06/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227977143_A/California/07/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227977167_A/California/07/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229299532_A/Texas/04/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227831789_A/Texas/05/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229299512_A/Texas/05/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237624336_A/swine/Alberta/O MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
***********:*******************:************ *****
gi|229598886_A/Texas/15/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892754_A/Canada-NS/RV153 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEGMSR 100
gi|229536033_A/Minnesota/02/20 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSCYLSDMTLEEMSR 100
gi|229536107_A/Nebraska/02/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229535811_A/Texas/09/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396500_A/Ohio/07/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396477_A/New_York/19/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396402_A/New_York/31/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396413_A/New_York/23/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396387_A/New_York/18/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396449_A/New_York/15/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396351_A/New_York/12/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396373_A/New_York/11/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396433_A/New_York/10/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396363_A/New_York/06/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229484061_A/Canada-ON/RV152 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229535829_A/California/14/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892761_A/Canada-ON/RV152 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892770_A/Canada-ON/RV152 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892764_A/Canada-AB/RV153 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237511869_A/Mexico/4108/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237511872_A/Mexico/4115/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237511860_A/Mexico/4486/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237511866_A/Mexico/4603/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237511857_A/Mexico/4604/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892767_A/Canada-NS/RV153 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892758_A/Mexico/InDRE411 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229783375_A/Korea/01/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229783386_A/New_York/1669/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229783407_A/New_York/1682/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229536016_A/Arizona/01/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229536115_A/Michigan/02/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229535991_A/South_Carolina/ GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229462691_A/Castilla-La GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229462727_A/Castilla-La GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229462715_A/Pais_Vasco/GP20 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229462703_A/Valencia/GP4/20 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229484054_A/Canada-NS/RV153 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229484058_A/Mexico/InDRE448 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229368684_A/Denmark/513/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396460_A/Texas/06/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229536007_A/Kansas/03/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227977123_A/California/08/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227977155_A/California/08/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227809839_A/California/04/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227977111_A/California/04/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|228017753_A/California/06/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227977143_A/California/07/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227977167_A/California/07/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229299532_A/Texas/04/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227831789_A/Texas/05/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229299512_A/Texas/05/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237624336_A/swine/Alberta/O GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
************************************* ******** ***
gi|229598886_A/Texas/15/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892754_A/Canada-NS/RV153 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229536033_A/Minnesota/02/20 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229536107_A/Nebraska/02/200 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229535811_A/Texas/09/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396500_A/Ohio/07/2009 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396477_A/New_York/19/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396402_A/New_York/31/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396413_A/New_York/23/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396387_A/New_York/18/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396449_A/New_York/15/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396351_A/New_York/12/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396373_A/New_York/11/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396433_A/New_York/10/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396363_A/New_York/06/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229484061_A/Canada-ON/RV152 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229535829_A/California/14/2 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892761_A/Canada-ON/RV152 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892770_A/Canada-ON/RV152 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892764_A/Canada-AB/RV153 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237511869_A/Mexico/4108/200 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237511872_A/Mexico/4115/200 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237511860_A/Mexico/4486/200 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237511866_A/Mexico/4603/200 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237511857_A/Mexico/4604/200 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892767_A/Canada-NS/RV153 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892758_A/Mexico/InDRE411 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229783375_A/Korea/01/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229783386_A/New_York/1669/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229783407_A/New_York/1682/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229536016_A/Arizona/01/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229536115_A/Michigan/02/200 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229535991_A/South_Carolina/ DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229462691_A/Castilla-La DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229462727_A/Castilla-La DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229462715_A/Pais_Vasco/GP20 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229462703_A/Valencia/GP4/20 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229484054_A/Canada-NS/RV153 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229484058_A/Mexico/InDRE448 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229368684_A/Denmark/513/200 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396460_A/Texas/06/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229536007_A/Kansas/03/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227977123_A/California/08/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227977155_A/California/08/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227809839_A/California/04/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227977111_A/California/04/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|228017753_A/California/06/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227977143_A/California/07/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227977167_A/California/07/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229299532_A/Texas/04/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227831789_A/Texas/05/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229299512_A/Texas/05/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237624336_A/swine/Alberta/O DWFTLMPRQKIIGPLCVRLDQAIMEKNIVLKANISVIFNRLETLILLRAF 150
*** ******************:**********:****************
gi|229598886_A/Texas/15/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892754_A/Canada-NS/RV153 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229536033_A/Minnesota/02/20 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229536107_A/Nebraska/02/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229535811_A/Texas/09/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396500_A/Ohio/07/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396477_A/New_York/19/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396402_A/New_York/31/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396413_A/New_York/23/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396387_A/New_York/18/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396449_A/New_York/15/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396351_A/New_York/12/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396373_A/New_York/11/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396433_A/New_York/10/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396363_A/New_York/06/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229484061_A/Canada-ON/RV152 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229535829_A/California/14/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892761_A/Canada-ON/RV152 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892770_A/Canada-ON/RV152 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892764_A/Canada-AB/RV153 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237511869_A/Mexico/4108/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237511872_A/Mexico/4115/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237511860_A/Mexico/4486/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237511866_A/Mexico/4603/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237511857_A/Mexico/4604/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892767_A/Canada-NS/RV153 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892758_A/Mexico/InDRE411 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229783375_A/Korea/01/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229783386_A/New_York/1669/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229783407_A/New_York/1682/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229536016_A/Arizona/01/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229536115_A/Michigan/02/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229535991_A/South_Carolina/ TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229462691_A/Castilla-La TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229462727_A/Castilla-La TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229462715_A/Pais_Vasco/GP20 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229462703_A/Valencia/GP4/20 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229484054_A/Canada-NS/RV153 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229484058_A/Mexico/InDRE448 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229368684_A/Denmark/513/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396460_A/Texas/06/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229536007_A/Kansas/03/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227977123_A/California/08/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227977155_A/California/08/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227809839_A/California/04/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227977111_A/California/04/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|228017753_A/California/06/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227977143_A/California/07/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227977167_A/California/07/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229299532_A/Texas/04/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227831789_A/Texas/05/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229299512_A/Texas/05/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237624336_A/swine/Alberta/O TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
**************************************************
gi|229598886_A/Texas/15/2009 FAWRNCDENGRPSLPPEQK 219
gi|229892754_A/Canada-NS/RV153 FAWRNCDENGRPSLPPEQK 219
gi|229536033_A/Minnesota/02/20 FAWRNCDENGRPSLPPEQK 219
gi|229536107_A/Nebraska/02/200 FAWRNCDENGRPSLPPEQK 219
gi|229535811_A/Texas/09/2009 FAWRNCDENGRPSLPPEQK 219
gi|229396500_A/Ohio/07/2009 FAWRNCDENGRPSLPPEQK 219
gi|229396477_A/New_York/19/200 FAWRNCDENGRPSLPPEQK 219
gi|229396402_A/New_York/31/200 FAWRNCDENGRPSLPPEQK 219
gi|229396413_A/New_York/23/200 FAWRNCDENGRPSLPPEQK 219
gi|229396387_A/New_York/18/200 FAWRNCDENGRPSLPPEQK 219
gi|229396449_A/New_York/15/200 FAWRNCDENGRPSLPPEQK 219
gi|229396351_A/New_York/12/200 FAWRNCDENGRPSLPPEQK 219
gi|229396373_A/New_York/11/200 FAWRNCDENGRPSLPPEQK 219
gi|229396433_A/New_York/10/200 FAWRNCDENGRPSLPPEQK 219
gi|229396363_A/New_York/06/200 FAWRNCDENGRPSLPPEQK 219
gi|229484061_A/Canada-ON/RV152 FAWRNCDENGRPSLPPEQK 219
gi|229535829_A/California/14/2 FAWRNCDENGRPSLPPEQK 219
gi|229892761_A/Canada-ON/RV152 FAWRNCDENGRPSLPPEQK 219
gi|229892770_A/Canada-ON/RV152 FAWRNCDENGRPSLPPEQK 219
gi|229892764_A/Canada-AB/RV153 FAWRNCDENGRPSLPPEQK 219
gi|237511869_A/Mexico/4108/200 FAWRNCDENGRPSLPPEQK 219
gi|237511872_A/Mexico/4115/200 FAWRNCDENGRPSLPPEQK 219
gi|237511860_A/Mexico/4486/200 FAWRNCDENGRPSLPPEQK 219
gi|237511866_A/Mexico/4603/200 FAWRNCDENGRPSLPPEQK 219
gi|237511857_A/Mexico/4604/200 FAWRNCDENGRPSLPPEQK 219
gi|229892767_A/Canada-NS/RV153 FAWRNCDENGRPSLPPEQK 219
gi|229892758_A/Mexico/InDRE411 FAWRNCDENGRPSLPPEQK 219
gi|229783375_A/Korea/01/2009 FAWRNCDENGRPSLPPEQK 219
gi|229783386_A/New_York/1669/2 FAWRNCDENGRPSLPPEQK 219
gi|229783407_A/New_York/1682/2 FAWRNCDENGRPSLPPEQK 219
gi|229536016_A/Arizona/01/2009 FAWRNCDENGRPSLPPEQK 219
gi|229536115_A/Michigan/02/200 FAWRNCDENGRPSLPPEQK 219
gi|229535991_A/South_Carolina/ FAWRNCDENGRPSLPPEQK 219
gi|229462691_A/Castilla-La FAWRNCDENGRPSLPPEQK 219
gi|229462727_A/Castilla-La FAWRNCDENGRPSLPPEQK 219
gi|229462715_A/Pais_Vasco/GP20 FAWRNCDENGRPSLPPEQK 219
gi|229462703_A/Valencia/GP4/20 FAWRNCDENGRPSLPPEQK 219
gi|229484054_A/Canada-NS/RV153 FAWRNCDENGRPSLPPEQK 219
gi|229484058_A/Mexico/InDRE448 FAWRNCDENGRPSLPPEQK 219
gi|229368684_A/Denmark/513/200 FAWRNCDENGRPSLPPEQK 219
gi|229396460_A/Texas/06/2009 FAWRNCDENGRPSLPPEQK 219
gi|229536007_A/Kansas/03/2009 FAWRNCDENGRPSLPPEQK 219
gi|227977123_A/California/08/2 FAWRNCDENGRPSLPPEQK 219
gi|227977155_A/California/08/2 FAWRNCDENGRPSLPPEQK 219
gi|227809839_A/California/04/2 FAWRNCDENGRPSLPPEQK 219
gi|227977111_A/California/04/2 FAWRNCDENGRPSLPPEQK 219
gi|228017753_A/California/06/2 FAWRNCDENGRPSLPPEQK 219
gi|227977143_A/California/07/2 FAWRNCDENGRPSLPPEQK 219
gi|227977167_A/California/07/2 FAWRNCDENGRPSLPPEQK 219
gi|229299532_A/Texas/04/2009 FAWRNCDENGRPSLPPEQK 219
gi|227831789_A/Texas/05/2009 FAWRNCDENGRPSLPPEQK 219
gi|229299512_A/Texas/05/2009 FAWRNCDENGRPSLPPEQK 219
gi|237624336_A/swine/Alberta/O FAWRNCDENGRPSLPPEQK 219
*******************
