RNA ligase

From Proteopedia

spinqualitylabelsall models Se-Met RNA ligase (PDB code 1vgj) Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image RNA ligase (LigR) is an enzyme which ligates two ribonucleotide chains using ATP and producing AMP, diphosphate and the ligated ribonucleotide chain[1]. See more details in T4 RNA ligase 2 (Rnl2) and Ligases.

3D Structures of RNA ligase

Updated on 02-October-2017

2hvr, 2hvs – T4LigR 2 + DNA + nucleotide – Enterobacteria phage T4
1s68 - T4LigR 2 N-terminal
2c5u – T4LigR 1 RNA-binding domain
1vgj, 1vdx – LigR – Pyrococcus horikoshii
2vug – LigR – Pyrococcus abyssi
1xdn – LigR 1 editing – Trypanosoma brucei
1iuh – LigR 2’-5’ – Thermus thermophilus
4qak - LigR 2’-5’ – Escherichia coli
5cot – aLigR – amoeba
5cou – aLigR + ATP
5d1o, 5d1p – LigR ATP-dependent + ATP – Methanothermobacter thermautotrophicus

References

1. ↑ Nichols NM, Tabor S, McReynolds LA. RNA ligases. Curr Protoc Mol Biol. 2008 Oct;Chapter 3:Unit3.15. doi:, 10.1002/0471142727.mb0315s84. PMID:18972386 doi:http://dx.doi.org/10.1002/0471142727.mb0315s84