User:Karsten Theis/Sandbox 2
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For authors: contributing content
- Help:Editing
- Proteopedia:How to Make a Page
- Proteopedia:Guidelines for Ethical Writing
- Remixing
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- Proteopedia:Cookbook
- Proteopedia:DIY:Scenes
- Proteopedia:How to Make a Scene
- Proteopedia:Practical Guide to Advanced Proteopedia Authoring and Its Use in Teaching
- Help:Quiz
- Questions? Stuck? Need help? Feel free to contact us directly, or subscribe to, and post questions on the Proteopedia:Email list.
Creating Molecular Scenes
- Proteopedia:DIY:Scenes
- Help:Uploading molecules
- Biological Unit: Showing
- Help:Errors
- Proteopedia:Rotating vs still models
- Proteopedia:Cookbook
- SAT) when editing a page: please disable 'Show preview on first edit' in the 'Editing' tab within 'my preferences'. Additionally, the SAT will never be displayed while the editing changes are being previewed (you clicked on the 'Show Preview' button).
Static Images
- To show a static image (jpeg, png, gif) file in a Proteopedia page, first you need to be sure you have the right to share the image and allow unrestricted re-use by others (see Proteopedia:Terms of Service). If yes, then you need to upload the image into Proteopedia: see Video 5: Uploading an image or file and adding an image to a page.
- For help on formatting the image within the page, see Wiki markup: Images or for even more detail, Wikipedia:Extended image syntax.
Teaching
- For Teaching with Proteopedia, see Teaching Strategies Using Proteopedia and Teaching_Scenes, Tutorials, and Educators' Pages.
- High school teachers' resources
- Adoptions in College and University Classes
- Molecular Workbench
- New educational pages may be announced to subscribers to the Proteopedia:Email list.
Software for use with Proteopedia
- Java can be used to improve performance of molecular scenes in Proteopedia. Please see Installing and enabling Java.
- Java may be a security risk. Please see How to be as safe as possible with Java.
- Any molecule that you see in Proteopedia can be explored further using FirstGlance in Jmol. Every page titled with a PDB identification code has a link to explore that model in FirstGlance.
- Molecular views obtained in FirstGlance can become green links in Proteopedia (Instructions).
- You can make presentation-ready animations that can be dropped into Powerpoint slides from any scene in Proteopedia or FirstGlance. See Help:Making animations for Powerpoint. (At right: 1ijw)
Interactive 3D "Supplementary Materials" for Journal Publications
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- For hiding these until the date of publication, please see Proteopedia:Workbench.
Protecting Pages
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- See also Text Directionality regarding right-to-left languages such as Arabic or Hebrew.
Proteopedia Speed
- Proteopedia will render faster in your computer if you enable the use of Java (see above).
- Create fast pages: Following these simple tips your Proteopedia pages might load and render faster.
Comments
Users of Proteopedia are invited to comment on published structures. Comments can raise questions about the interpretation, validity or quality of the model, cite other pertinent resources, congratulate the authors on a job well done, discuss implications of the model, etc.
How to comment on articles or published structures: Log in to Proteopedia and add your comment by editing the discussion tab associated with each page. You can comment on any page in Proteopedia.
Errors
See Help:Errors for guidelines on how to proceed when your page seems gone forever.
Contact
Feel free to contact us with any questions or suggestions.
Proteopedia Speed
- Render faster: If you have Java available on your computer, molecular models in Proteopedia pages will be rendered faster:
- If you are a registered user you can set the use of Java as a default, in one of the preferences in your personal profile. (Visit the
my preferenceslink at top-right.) - To use Java occasionally on a one-page basis, add
?use=javato the page URL, like this: http://proteopedia.org/w/G_protein-coupled_receptor?use=java. - For a complete description see Using Java for Rendering Structures.
- If you are a registered user you can set the use of Java as a default, in one of the preferences in your personal profile. (Visit the
Your Heading Here (maybe something like 'Structure')
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