Gag polyprotein
From Proteopedia
The Gag polyprotein (Gag) is part of the basic infrastructure of retroviruses. The Gag is processed during maturation of matrix protein, capsid protein, spacer peptide and nucleocapsid protein.
3D structures of factor IX
Gag polyprotein from HIV-1
2h3i – Gag residues 2-132 – HIV-1
2h3f, 2h3i, 1uph - Gag residues 2-132 – NMR
1l6n - Gag residues 1-283 – NMR
1gwp - Gag residues 132-283 – NMR
2jmg, 2nv3 - Gag residues 2-132 (mutant) – NMR
1u57 - Gag residues 1-48 – NMR
1esk - Gag residues 12-53 – NMR
1baj – Gag C terminal
2znf – Gag zinc fingerlike domain]] - NMR
2h3q, 2h3v, 2h3z - Gag residues 2-132 + phosphatidyl inositol bisphosphate - NMR
1mt7, 1mt8 – Gag MA-CA cleavage site + protease retropepsin (mutant)
1agb, 1agc, 1agd, 1age, 1agf – Gag peptide + β-2 microglobulin + B*0801
3p9g, 3p9h, 3obu, 3obx, 1m4p, 1m4q - Gag peptide + tumor susceptibility gene 101 protein N terminal
1fgl – Gag residues 81-105 + cyclophilin A
2xde - Gag residues 1-146 + inhibitor
2x2d - Gag residues 133-278 + peptidyl-prolyl cis-trans isomerase A
1sje, 1sjh – Gag peptide + HLA-DR1
1kj4, 1kj7, 1kjf, 1kjg - Gag peptide + POL polyprotein
Gag polyprotein from HIV-2
2wlv - Gag residues 99-242 – HIV-2
2ec7 – Gag – NMR
Gag polyprotein from Rous sarcoma virus
3g0v, 3g1g, 3g21 - Gag residues 389-465 – Rous sarcoma virus
3g26, 3g28, 3g29 - Gag residues 389-465 (mutant)
1p7n – Gag N terminal
1em9 - Gag N terminal – NMR
1eoq - Gag C terminal – NMR
1a6s – Gag M domain (mutant) - NMR
Gag polyprotein from Simian immunodeficiency virus
1ecw, 1ed1 - Gag
2xs1 - Gag peptide + programmed cell death 6-interacting protein
Gag polyprotein from Moloney murine leukemia virus
1u7k - Gag residues 215-345
1u6p – Gag fragment + DNA – Moloney murine leukemia virus
Gag polyprotein from equine infectious anemia virus
1hek – Gag
Gag polyprotein from Mason-Pfizer monkey virus
1cl4 - Gag residues 49-80 (mutant) – NMR
