This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Chemotaxis protein

From Proteopedia

Revision as of 09:26, 27 March 2014 by Michal Harel (Talk | contribs)
Jump to: navigation, search

Template:STRUCTURE 1e6m

Chemotaxis proteins direct cell movement according to certain chemicals in their environment. For details on chemotaxis protein see

Contents

3D structures of chemotaxis protein

Updated on 27-March-2014

CheY

1ab6, 1d4z, 1e6m, 1e6k, 1e6l, 1jbe, 1mih, 3oo0, 3oo1 – EcCheY (mutant) – Escherichia coli
1tmy, 2tmy, 3tmy, 4tmy - TmCheY – Thermotoga maritima
4h60, 4hnr – VcCheY – Vibrio cholerae
4hnq - VcCheY (mutant)
3gwg – HpCheY - Helicobacter pylori
3h1f, 3h1g - HpCheY (mutant)
2id7, 2id9, 2idm – EcCheY-phosphono (mutant)
1djm – EcCheY – NMR
2chy – StCheY - Salmonella typhimurium

CheY complexes

1zdm – EcCheY + Xe
3h1e - HpCheY + BeF3 + Mn
3f7n, 3fft, 3ffw, 3ffx, 3fgz, 3myy, 3olv, 3olw, 3olx, 3oly - EcCheY (mutant) + BeF3 + Mn
4hns - VcCheY + BeF3 + Mg
4lx8 - VcCheY + Mg
1fqw - EcCheY + BeF3 + Mn
3rvj, 3rvk, 3rvl, 3rvm, 3rvn, 3rvo, 3rvp, 3rvq, 3rvr, 3rvs - EcCheY (mutant) + BeF3 + Mn
1bdj – EcCheY + aerobic respiration control protein HPT domain
1u8t – EcCheY + flagellar motor switch protein FLIM
2b1j, 1f4v - EcCheY + flagellar motor switch protein FLIM N terminal
1ffg, 1ffs – EcCheY + CheA CheY-binding domain
1u0s - TmCheY response regulating domain + CheA P2 domain
1ffw – EcCheY + CheA CheY-binding domain + imido phosphate
1kmi - EcCheY + CheZ
2lp4 - EcCheY + CheA
2fka, 2flk, 2flw, 2fmf, 2fmh, 2fmi, 2fmk, 2pl9, 2pmc – StCheY + CheZ peptide
2che, 2chf – StCheY + Mg
4iga - TmCheY + flagellar motor switch protein FLIM peptide

CheX

1xko– TmCheX
3hm4 – CheX – Desulfovibrio desulfuricans
3hzh – CheX + Che-3 – Borrelia burgdorferi

CheC

1xkr – TmCheC
2f9z – TmCheC + CheD
3qta – CheC – Haloarcula marismortui

CheR

1bc5 – StCheR + chemotaxis receptor peptide
1af7 – StCheR

CheA

1fwp – EcCheA – NMR
1b3q – TmCheA dimerization, kinase and regulatory domains
1i5n – StCheA P1 domain
1i58, 1i59, 1i5a, 1i5b, 1i5d - TmCheA P4 domain + ATP analog
1i5c - TmCheA P4 domain (mutant) + ADP
1tqg – TmCheA phosphotransferase domain
2ld6 – TmCheA HPT domain - NMR
2ch4 - TmCheA kinase and regulatory domains + CheW
3ur1, 4jpb – TmCheA + CheW + methyl-accepting Che

CheB

1a2o, 1chd– StCheB

CheW

1k0s – TmCheW
2ho9 – EcCheW - NMR

Aspartate chemotaxis receptor

1jmw, 1vls – StChe LBD
1lih – StChe LBD (mutant)
1was – StChe LBD
1wat, 1vlt, 2lig – StChe LBD + aspartate
2asr – EcChe

Methyl-accepting chemotaxis protein

2m7u, 2m7v – TeMche – Thermosynechococcus elongatus
3vv4 – TeMche GAF domain
4fof, 4glq – TeMche GAF domain (mutant)
3w2z – Mche residues 221-397 – Nostoc
3g67 – TmMche
3g6b – TmMche (mutant)
2ch7 – TmMche cytoplasmic domain
1qu7 – EcMcheI cytoplasmic domain
2ld6 – EcMche peptide - NMR
3atp - EcMcheI LBD + serine
2d4u – EcMcheI LBD (mutant)
3zx6 – EcMcheI/HAMP
1jmw - StMche LBD (mutant)
2qhk, 4exo – Mche N-terminal – Vibrio parahaemolyticus
3c8c – Mche N-terminal
3b47 – Mche periplasmic domain – Geobacter sulfurreducens
4it2 - Mche H-Nox domain Mn-porphyrin – Caldanaerobacter subterraneus

Heme-containing methyl-accepting chemotaxis protein

3eee, 3iqb, 3lah, 3lai, 3sj5, 4fdk – TtMche H-Nox domain (mutant)
1xbn – TtMche – Thermoanaerobacter tengcongensis
1u4h, 1u55, 1u56, 3tf0, 3tf1 - TtMche H-Nox domain
3m0b - TtMche H-Nox domain Ru-porphyrin
3nvr, 3nvu – TtMche N terminal (mutant)

Flagellar motor protein FLIN

1yab – TmFLIN

Chemotaxis protein MotB

3cyp, 3imp, 3s02, 3s03, 3s06, 3s0h, 3s0w, 3s0y – HpMotB C terminal
3cyq – HpMotB C terminal + N-acetylmuramic acid
2zov, 2zvy, 2zvz - StMotB C terminal

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman, Lynmarie K Thompson, Alexander Berchansky

Personal tools