Tyrosine kinase

From Proteopedia

Revision as of 09:48, 27 November 2016 by Michal Harel (Talk | contribs)
Jump to: navigation, search

Human Fyn tyrosine kinase kinase domain complex with inhibitor staurosporine (PDB code 2dq7).

Drag the structure with the mouse to rotate

3D structures of tyrosine kinase

Updated on 27-November-2016 {{#tree:id=OrganizedByTopic|openlevels=0|

  • NON-RECEPTOR TYROSINE KINASES - nRTK
  • Fyn tyrosine kinase (Domains: SH3 80-141; SH2 142-247; kinase 260-537)
    • 1shf, 3ua6 – hTK Fyn SH3 domain – human
    • 3h0f, 3h0h, 3h0i, 3cqt - hTK Fyn SH3 domain (mutant)
    • 2l2p, 2lp5 - cTK Fyn SH3 domain (mutant)- chicken - NMR
    • 3uf4 – mTK Fyn SH3-SH2 domain – mouse
    • 1zbj - hTK Fyn SH3 domain – NMR
    • 1g83 - hTK Fyn SH2+SH3 domains (mutant)
  • Fyn complex
    • 1fyn, 4znx - hTK Fyn SH3 domain + peptide
    • 1nyf, 1nyg - hTK Fyn SH3 domain + peptide – NMR
    • 1efn, 1avz - hTK Fyn SH3 domain + HIV Nef protein
    • 1m27 - hTK Fyn SH3 domain + SH2 domain protein 1A + SLAM peptide
    • 4d8d - hTK Fyn SH3 domain (mutant) + HIV Nef protein
    • 3ua7 – hTK Fyn SH3 domain + hepatitis virus peptide
    • 4eik - hTK Fyn SH3 domain + VSL12 peptide
    • 1aot, 1aou - hTK Fyn SH2 domain + phosphopeptide - NMR
    • 2dq7 – hTK kinase domain + staurosporine
  • Abelson tyrosine kinase
  • Abl1 SH2 domain residues 120-220
  • Abl1 SH3 domain residues 60-121
    • 1ju5 - hTK SH3 domain (mutant) + CRK SH2 domain + phosphopeptide - NMR
    • 1awo - hTK SH3 domain + phosphopeptide – NMR
    • 1bbz - hTK SH3 domain + peptide
    • 2o88 - hTK SH3 domain (mutant} + peptide
    • 1abo - mTK SH3 domain + peptide
    • 1abq - mTK SH3 domain
    • 4jjb, 4jjc, 4jjd - hTK abl SH3 domain
    • 4j9b, 3egu, 3eg2, 3eg3, 3eg0, 3eg1 - hTK abl SH3 domain (mutant)
    • 4j9c, 4j9e, 4j9i - hTK abl SH3 domain (mutant) + p17 peptide
    • 4j9d, 4j9f - hTK abl SH3 domain (mutant) + p0 peptide
    • 4j9g, 4j9h - hTK abl SH3 domain (mutant) + p7 peptide
  • Abl1 SH3-SH2 domain
    • 2abl - hTK SH3-SH2 domain
    • 2fo0 - hTK SH3-SH2 domain (mutant)
  • Abl1 kinase domain residues 229-512
  • Abl1 SH2-kinase domain residues 119-531
    • 4xey - hTK SH2-kinase domain
  • Abl1 SH3-SH2-kinase domain residues 1-531
    • 1opl - hTK SH3-SH2-kinase domain (mutant}
  • Abl1 F-actin binding domain residues 1007-1130
    • 1zzp - hTK abl F-actin binding domain – NMR
  • Abl2 SH2 domain residues 165-273
    • 4eih - hTK SH2 domain
    • 2ecd - hTK SH2 domain – NMR
  • Abl2 kinase domain residues 279-546
    • 3gvu - hTK kinase domain + Gleevec
    • 3hmi - hTK kinase domain + inhibitor
    • 2xyn - hTK kinase domain + cancer drug
  • Abl2 C-terminal residues 1058-1182
    • 2kk1 – hTK C terminal – NMR
  • Anaplastic lymphoma kinase (Alk)
  • Csk tyrosine kinase
    • 3eac - hTK SH2 domain
    • 3eaz - hTK SH2 domain (mutant)
    • 2rsy - hTK SH2 domain + CBP phosphopeptide - NMR
    • 1csk - hTK SH3 domain
    • 1jeg - hTK SH3 domain + tyrosine phosphatase peptide - NMR
    • 1byg - hTK kinase domain + staurosporine
    • 3d7t, 3d7u - hTK kinase domain (mutant) + C-Src
    • 1k9a - TK C terminal - rat
  • p55-blk tyrosine kinase
    • 1blj, 1blk - mTK p55-blk SH2 domain – NMR
  • Src tyrosine kinase (Domains: SH3 85-140; SH2 140-251; kinase 253-535)
  • Src tyrosine kinase SH2 domain
  • Src tyrosine kinase SH3 domain
  • Src tyrosine kinase kinase domain residues 253-535
  • Src tyrosine kinase C terminal domain
    • 1k9a – rTK – rat
  • Src tyrosine kinase SH2+SH3+kinase domains residues 85-535
    • 1ksw – hTK (mutant)+ ADP derivative
    • 1y57 – hTK + inhibitor
    • 4k11 – hTK (mutant) + inhibitor
  • Src tyrosine kinase SH2+SH3+kinase+C terminal domains
  • Src tyrosine kinase N terminal+SH2+SH3+kinase domains
    • 2h8h – hTK + inhibitor
  • Lymphocyte-specific tyrosine kinase Lck (Domains: SH3 58-118; SH2 122-225; kinase 230-500)
    • 1kik, 1h92 - hTK Lck SH3 domain – NMR
    • 2iim - hTK Lck SH3 domain
    • 4d8k, 1x27 - hTK Lck SH3-SH2 domain
    • 3lck - hTK Lck kinase domain
  • Lck complex
  • Syk - spleen tyrosine kinase
  • Syk complex
  • Itk/Tsk tyrosine kinase
  • Zap tyrosine kinase
    • 4k2r – hTK Zap
    • 2ozo - hTK Zap (mutant)
    • 1m61 - hTK Zap SH2 domain
  • Zap complex
    • 2oq1 - hTK Zap SH2 domain + peptide
    • 1u59 - hTK Zap kinase domain + staurosporine
  • Pyk2 tyrosine kinase or or protein-tyrosine kinase 2-β
    • 3cc6, 3fzo - hTK Pyk2 kinase domain
    • 3gm2 - hTK Pyk2 FAT domain
    • 3gm3 - hTK Pyk2 FAT domain (mutant)
    • 4eku – hTK Pyk2 FERM domain
    • 2lk4 - hTK Pyk2 FAT domain – NMR
  • Pyk2 complex
    • 3fzp - hTK Pyk2 kinase domain + ATPγS
    • 3fzr, 3fzs, 3fzt, 3h3c, 3et7 - hTK Pyk2 kinase domain + inhibitor
    • 3gm1, 4r32 - hTK Pyk2 FAT domain + paxillin peptide
    • 4xek, 4xev, 4xef - hTK Pyk2 FAT domain + leupaxin peptide
    • 4h1j - hFAK2 kinase domain + pyrazole inhibitor
    • 4h1m - hFAK2 kinase domain + indole inhibitor
    • 3u3c, 3u3f – hFAK2 FAT domain (mutant) + paxillin LD2 motif
  • CapAB tyrosine kinase
    • 3bfv - SaTK CapA1/CapB2 – Staphylococcus aureus
    • 2ved - SaTK CapA1/CapB2 + Mg + ADP
  • Fer tyrosine kinase
    • 2kk6 - hTK Fer SH2 domain – NMR
  • Ptk6 tyrosine kinase
    • 1rja - hTK Ptk6 SH2 domain – NMR
    • 2kgt - hTK Ptk6 SH3 domain – NMR
  • Lyn tyrosine kinase (Domains: SH3 39-101; SH2 115-229; kinase 239-512)
    • 4tzi - hTK Lyn SH2 domain
    • 1w1f - hTK Lyn SH3 domain – NMR
    • 1wa7 - hTK Lyn SH3 domain + peptide – NMR
    • 3a4o - hTK Lyn residues 233-512 + staurosporine
    • 2zv7 - mTK Lyn kinase domain
    • 2zv8 - mTK Lyn kinase domain + AMPPNP
    • 2zv9 - mTK Lyn kinase domain + PP2
    • 2zva - mTK Lyn kinase domain + cancer drug
  • Txk tyrosine kinase
    • 2dm0 - hTK Txk SH2 domain – NMR
  • Yes tyrosine kinase
    • 2hda - hTK Yes SH3 domain
  • Tec tyrosine kinase
    • 2lul - hTK Tec PH domain - NMR
  • Fes/Fps tyrosine kinase
    • 1wqu, 2dcr - hTK Fes SH2 domain - NMR
    • 3bkb - hTK Fes SH2+kinase domain - NMR
    • 4dyl - hTK Fes F-Bar domain
    • 3cbl - hTK Fes SH2+kinase domain + peptide
    • 3cd3 - hTK Fes SH2+kinase domain + peptide + staurosporine
    • 4e93 - hTK TFes + inhibitor
  • Etk tyrosine kinase
    • 3cio - EcTK Etk kinase domain – Escherichia coli
  • Wzc tyrosine kinase
    • 3la6 - EcTK Wzc kinase domain
  • Ros tyrosine kinase
    • 3zbf - hTK Ros kinase domain + cancer drug
    • 4uxl - hTK Ros kinase domain + inhibitor
  • Tyk tyrosine kinase (Domains: SH2+FERM 23-540; pseudokinase 541-880; kinase 880-1170)
    • 3lxn, 3lxp, 3nyx, 3nz0, 4e1z, 4e20, 4gfo, 4gih, 4gii, 4gj2, 4gj3, 4py1 - hTK Tyk2 kinase domain (mutant) + inhibitor
    • 4gvj - hTK Tyk2 kinase domain (mutant) + ADP
    • 4oli - hTK Tyk2 pseudokinase + kinase domains
    • 3zon - hTK Tyk2 pseudokinase domain
    • 4wov - hTK Tyk2 pseudokinase domain + inhibitor
    • 4po6 - hTK Tyk2 SH2+FERM domains + IFNAR1 peptide
  • Kit tyrosine kinase
    • 2ec8 - hNTPK Kit extracellular domain
    • 3g0e, 3g0f - hNTPK Kit kinase domain (mutant) + cancer drug
    • 2e9w, 2o26 - hNTPK Kit extracellular domain + stem cell factor
  • Hck tyrosine kinase
    • 3hck - hTK SH2 domain - NMR
    • 1bu1 - hTK SH3 domain
    • 4hck, 5hck - hTK SH3 domain - NMR
    • 2oj2, 2oi3 - hTK SH3 domain + peptide - NMR
    • 3rbb, 3rea, 3reb - hTK SH3 domain (mutant) + HIV NEF
    • 3nhn - hTK SH3-SH2-linker domain
    • 4u5w - hTK Hck SH3-SH2 domains + NEF
    • 2c0i, 2c0o, 2c0t - hTK SH3-SH2-SH1 domain + inhibitor
    • 2hk5 - hTK kinase domain + inhibitor
    • 1qcf, 3vry, 3vrz, 3vs0, 3vs1, 3vs2, 3vs3, 3vs4, 3vs5, 3vs6, 3vs7 - hTK SH3-SH2-kinase-tail domain + inhibitor
    • 1ad5 - hTK SH3-SH2-kinase-tail domain + AMPPNP
    • 2hck - hTK SH3-SH2-kinase-tail domain + quercetin
    • 4lud, 4lue - hTK Hck SH2+SH3+kinase domain (mutant) + fluorescent compound
    • 4orz - hTK Hck SH3 domain (mutant) + NEF + single domain antibody

  • RECEPTOR TYROSINE KINASES - RTK
  • Bruton’s tyrosine kinase (Domains: PH 1-170; SH3 216-273; SH2 273-378; kinase 378-659)
    • 2z0p - hTK Btk PH domain
    • 1btk – hTK Btk PH domain (mutant)
    • 3p08, 1k2p - hTK Btk kinase domain
    • 1aww, 1awx, 1qly - hTK Btk SH3 domain – NMR
    • 2ge9 - hTK Btk SH2 domain – NMR
    • 4xi2 - hTK Btk SH3-SH2-kinase domain
  • Btk complex
  • Fms tyrosine kinase
    • 2i0v - hTK Fms kinase domain
  • Fms complex
    • 2i0y, 2i1m - hTK Fms kinase domain + inhibitor
    • 3dpk - hTK Fms kinase domain (mutant) + inhibitor
    • 1flt – hTK Fms Igg-like domain + VEGF
    • 1qty - hTK Fms domain 2 + VEGF
  • Mer tyrosine kinase
    • 2dbj - hTK Mer FN2 domain – NMR
    • 2p0c - hTK Mer kinase domain
  • Mer complex
  • Bone marrow tyrosine kinase
    • 2ekx - hTK Bmx SH2 domain – NMR
    • 2ys2 - hTK Bmx Btk motif – NMR
  • Bone marrow tyrosine kinase complex
    • 3sxr - hTK Bmx kinase domain (mutant) + dasatinib
    • 3sxs - hTK Bmx kinase domain (mutant) + inhibitor
  • Musk tyrosine kinase
    • 3hkl - rTK Musk Fz-Crd domain
    • 1luf, 2iep - rTK Musk cytoplasmic domain
  • Brk tyrosine kinase or protein-tyrosine kinase 6
    • [[5da7v] - hTK Brk kinase domain
    • 5da3 - hTK Brk kinase domain + inhibitor

}}

  1. Hubbard SR, Till JH. Protein tyrosine kinase structure and function. Annu Rev Biochem. 2000;69:373-98. PMID:10966463 doi:http://dx.doi.org/10.1146/annurev.biochem.69.1.373
  2. Roskoski R Jr. Src protein-tyrosine kinase structure and regulation. Biochem Biophys Res Commun. 2004 Nov 26;324(4):1155-64. PMID:15504335 doi:http://dx.doi.org/10.1016/j.bbrc.2004.09.171
  3. Tolomeo M, Dieli F, Gebbia N, Simoni D. Tyrosine kinase inhibitors for the treatment of chronic myeloid leukemia. Anticancer Agents Med Chem. 2009 Oct;9(8):853-63. PMID:19538165
  4. Lengyel E, Sawada K, Salgia R. Tyrosine kinase mutations in human cancer. Curr Mol Med. 2007 Feb;7(1):77-84. PMID:17311534
  5. Kinoshita T, Matsubara M, Ishiguro H, Okita K, Tada T. Structure of human Fyn kinase domain complexed with staurosporine. Biochem Biophys Res Commun. 2006 Aug 4;346(3):840-4. Epub 2006 Jun 13. PMID:16782058 doi:10.1016/j.bbrc.2006.05.212
  6. Tou WI, Chen CY. Traditional Chinese medicine as dual guardians against hypertension and cancer? J Biomol Struct Dyn. 2012 Jul;30(3):299-317. Epub 2012 Jun 12. PMID:22694277 doi:10.1080/07391102.2012.680030

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

Personal tools