Believe It or Not!

From Proteopedia

(Redirected from Believe It or Not)
Jump to: navigation, search

A list of Useful, Useless or simply Interesting facts on Proteins, Structures and what's around them, automatically updated by OCA, the browser and database for structure and function.

The most common ...

  • The most common Sources are Homo sapiens, present in 17,483 PDB structures and Mus musculus, present in 4,368 PDB structures.
  • The most common Ligand is GOL, present in 23,759 PDB structures (excluding SO4)
  • The most common Space group is P 21 21, present in 32,728 PDB structures.

The most conspicuous ...

  • The least popular experiment type is Solution Scattering used on 3 structures (1ntj, 1ntl, 1r70) over 240,683 ( 0.00%)
  • The most popular experiment type is X-ray Diffraction used on 196,953 structures over 240,683 (81.83%)
  • The structures with the most biomolecules are 2zzs, 4dx9 with 32 each and 5lhy with 30.
  • The PDB structure with the most models is 2hyn, with 184 models.
  • The PDB structures with the most related structures are 4b2c, 4b2b with 287 related structures each.
  • The PDB structure with the most chains is 4udf with 240 chains.
  • The PDB structures with the longest chain are 4ug0, 5lks with 5,070 amino acids (alpha carbons only) each.
  • The PDB structures with the shortest chain (greater than one residue) are 1b2m, 1ehl, 1f0v, 1i8m, 1ijs, 1lgc, 1oup, 1pv4, 2ok0, 3j5l, 3j9m, 3rec, 3u2e, 4wti, 5tgm, 5uh6, 5uh9 with 2 residues each.
  • The PDB structure with the most amino acids is 5wyj with 35,276 amino acids (alpha carbons only).
  • The PDB structure with the largest number ALTLOC is 4m7p with 20 alternate location.
  • The PDB structure with the heaviest chain is 5fl8 with 559,708.12 .
  • The PDB structures with the most ligands are 3wu2, 5b66, 5h2f, 5ws6 with 21 ligands each.
  • The PDB structures with the largest number of distinct chemical elements are 3ow2, 5t5i with 12 elements each.
  • The 10 most popular Chemical Elements, excluding C,O,S,P,H,Na,Cl,K are Selenium (Se) on 7,143 PDB, Calcium (Ca) on 3,674 PDB, Zinc (Zn) on 3,658 PDB, Magnesium (Mg) on 2,643 PDB, Iron (Fe) on 1,937 PDB, Fluorine (F) on 1,162 PDB, Manganese (Mn) on 555 PDB, Copper (Cu) on 547 PDB, Iodine (I) on 428 PDB and Nickel (Ni) on 380 PDB.
  • The most exotic Chemical Elements are Americium (Am 4zhg), Bismuth (Bi 4h0w), Californium (Cf 5kic), Curium (Cm 4zhf), Hafnium (Hf 5fhw), Indium (In 1ind), Neon (Ne 2axt), Plutonium (Pu 4zhd), Antimony (Sb 4u5t), Scandium (Sc 3zi4), Titanium (Ti 5dyh) found in one PDB structure each.
  • The PDB structure with the largest file is 4pth with 25,711,447 bytes (compressed).
  • The PDB structure with the smallest file is 3rec with 2,938 bytes (compressed).
  • The PDB structures with the most sources are 2wsc, 2wse and 2wsf with 6 sources each.
  • There are 638 sources that occur in only a single entry. See Structures with Exotic Sources

Determination methods ...

  • The PDB structure solved with Electron Crystallography with the best resolution is 6kj3 with 0.6 Å.
  • The PDB structure solved with Electron Microscopy with the best resolution is 8rqb with 1.09 Å.
  • The PDB structures solved with Fiber Diffraction with the best resolution are 1hgv, 1hgz, 1hh0 with 2.4 Å each.
  • The PDB structure solved with Neutron Diffraction with the best resolution is 8rli with 0.91 Å.
  • The PDB structure solved with Powder Diffraction with the best resolution is 7qac with 2.29 Å.
  • The PDB structures solved with Solution Scattering with the best resolution are 1ntj, 1ntl, 1r70 with 30 Å each.
  • The PDB structures solved with X-ray Diffraction with the best resolution are 3nir, 5d8v with 0.48 Å each.
  • The mean resolution for PDB structures solved with Electron Crystallography is 2.66 ± 2.76 based on 268 structures
  • The mean resolution for PDB structures solved with Electron Microscopy is 3.9 ± 2.93 based on 28,435 structures
  • The mean resolution for PDB structures solved with Fiber Diffraction is 3.37 ± 0.7 based on 37 structures
  • The mean resolution for PDB structures solved with Neutron Diffraction is 1.92 ± 0.37 based on 87 structures
  • The mean resolution for PDB structures solved with Powder Diffraction is 2.96 ± 0.35 based on 7 structures
  • The mean resolution for PDB structures solved with Solution Scattering is 30 ± 0 based on 3 structures
  • The mean resolution for PDB structures solved with X-ray Diffraction is 2.12 ± 0.6 based on 196,953 structures
  • The PDB structure solved with Electron Crystallography with the worst resolution is 2dfs with 24.0 Å.
  • The PDB structures solved with Electron Microscopy with the worst resolution are 1m8q, 1mvw, 1o18, 1o19, 1o1a, 1o1b, 1o1c, 1o1d, 1o1e, 1o1f, 1o1g with 70.0 Å each.
  • The PDB structures solved with Fiber Diffraction with the worst resolution are 3hqv, 3hr2 with 5.16 Å each.
  • The PDB structure solved with Neutron Diffraction with the worst resolution is 1wqz with 3 Å.
  • The PDB structure solved with Powder Diffraction with the worst resolution is 1xft with 3.35 Å.
  • The PDB structures solved with Solution Scattering with the worst resolution are 1ntj, 1ntl, 1r70 with 30 Å each.
  • The PDB structure solved with X-ray Diffraction with the worst resolution is 2tma with 15 Å.

Overall Statistics ...

  • The mean PDB file is 188.51K ± 327.67K based on 129,438 files.
  • There is 1 structure file with 12 citations (1dtq) and 1 structure file with 4 citations (11ba).

Updated by OCA on Wed Aug 20 10:02:30 2025

Notes

  • 4tst is a useful PDB id for a non-existing structure *Search for this page with the word BelieveItOrNot -- all the words in the real title "Believe It Or Not!" are so common that they are ignored by the search index mechanism (see Help:Stop Words), so you will not succeed searching for the real title. This page is also linked to the Main Page.

See Also

Proteopedia Page Contributors and Editors (what is this?)

OCA, Eric Martz, Joel L. Sussman, Jaime Prilusky

Retrieved from "http://52.214.119.220/wiki/index.php/Believe_It_or_Not%21"
Personal tools