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- Main Page 20190127 (6,331 bytes)
19: ... [[Proteopedia:Video_Guide|Video Guide]] * [[Help:Contents|Help]]</span>
46: <!--Right, Proteopedia News and Contributions and Links--> - Help:Editing (24,612 bytes)
19: ...andbox]]. After it is completed, you can move the contents to a publically editable, permanent page with an ...
46: ...present in the page, you create new scenes (green links) by using the [[Scene authoring tools|Scene Autho...
116: ...h PDB entry page (like functional information and links to that PDB entry in other resources). You get a ...
213: ...f> and </ref> tags. You may include hyperlinks (see hyperlinked DOI example above). You can also...
242: *[[Help:Contents]] has a list of all tutorials and help within Pro... - Help:Contents (6,488 bytes)
9: ...e in the navigation box on the left. Entries have links to other entries (if you right-click them, the cu...
14: ...hrough the text of an entry, you will find "green links". When you click on them, you stay on the same pa... - Proteopedia:About (7,060 bytes)
5: ...s Purpose, History, Unique Capabilities, Types of Contents, and Usage Statistics. More details follow below.
21: ==Contents of Proteopedia==
31: ...ighlight sites and ligands, and molecule-specific links to other viewers and databases. If you click "Ran... - User:Ignacio Ibarra Del Río/Workbench/Structural analysis of DNA structures (4,313 bytes)
1: ...[[User:Ignacio_Ibarra_Del_Río/Workbench/Contents|contents]] for a list of articles.
38: * '''2kal''': Found in the NDB but with broken links. Proper files were downloaded from the PDB (PDB I... - User:Wayne Decatur/UNH BCHEM833 Structural Analysis Workshop Session Fall 2012 (17,130 bytes)
25: ...rnierlab/snornadb/main.php Yeast snoRNA Database] links to site of modification in ribosome.
54: **Organizational/Table of Contents
229: *For additional resources after the workshop and links herein and on the [[User:Wayne Decatur/UNH BCHEM8... - Teaching Scenes, Tutorials, and Educators' Pages (12,171 bytes)
5: ...Pages|protected]] from edits by others, but their contents may be '''freely copied and adapted into other pa...
111: ...://Atlas.MolviZ.Org Atlas of Macromolecules] with links to view each molecule in Proteopedia or FirstGlan... - Jmol/Cavities pockets and tunnels (22,245 bytes)
98: ...ing commands show the translucent tunnel with its contents rendered as sticks.
131: *Links to pages within Proteopedia using double brackets...
132: *Links to pages outside Proteopedia using single bracket... - Proteopedia:Policy (13,745 bytes)
8: ...Sussman]]. Your user page is a good place to keep links to articles you are working on, articles you refe...
23: ==Links to Wikipedia==
28: ====Additional Explanation about Links to Wikipedia====
35: ...ever hesitate to link to Wikipedia. However, such links to Wikipedia should nearly always be made on a pa...
36: ...ance problem, trying to find and update all those links. - Proteopedia:Problems (18,636 bytes)
13: ...lor:yellow;color:green">'''SOLVED'''</span> Green links need to work in Firefox version 2, with Java vers...
36: ...]] 19:22, 15 February 2009 (IST) ♣ Ligand green links are generated from the PDB file. I checked the PD...
40: ...upper case codes don't, e.g. [[4CPA]]. Similarly, links to Proteopedia from outside have the same problem...
42: ...osomes are two separate pages with nonoverlapping contents. It would be great if all pairs of the same term ...
59: ...:yellow;color:green">'''SOLVED'''</span> '''Scene links that have green displayed text that includes non-... - Proteopedia:Video Guide (3,773 bytes)
3: ...to guide you through using Proteopedia. At [[Help:Contents]] you will find written guides.
21: ...e also [[Topic pages]] and [[Proteopedia:Table of Contents]].)
23: The contents and design of seeded pages has been improved sinc...
47: ...he upper right, and the text (with embedded green links) can be very long, scrolling next to the molecula...
53: ==Video 7: Adding scenes (green links)== - Quality assessment for molecular models (11,872 bytes)
3: ...nd Helge Weissig, Wiley-Liss, 649 pages. Complete contents at [http://www.structuralbioinformaticsbook.com s...
53: ...nd Helge Weissig, Wiley-Liss, 649 pages. Complete contents at [http://www.structuralbioinformaticsbook.com s...
55: ...at [[Retractions and Fraud]], where you will find links to sites where you can search for retractions or ...
68: *[[Retractions and Fraud]], which includes links to sites where you can search for retractions or ... - Help:Teaching with Proteopedia (11,440 bytes)
11: ... you wish to emphasize. See the [[Main Page]] for links to videos that show you how to author pages in Pr...
58: ...r your students are invited to try authoring. The contents of these pages is not permanent, and will be eras...
102: *[[Help:Contents|Help]], a list of all Help pages within Proteoped... - Jmol (17,185 bytes)
109: ...View'' appears in the online journal articles and contents. The first journal to do this was [http://nature....
134: ...at looks like the typical Proteopedia green scene links, as described [[Demonstration of a complex animat... - Proteopedia:Main page develop (7,341 bytes)
9: ...ng|Editing]] <font color="blue">•</font> [[Help:Contents|Help]]</td>
25: ...n style="color:green" align="center">Green</span> links change the 3D image!</div>
88: ...create and edit, and <font color='green'>'''Green links'''</font> are easy to make! </div> - Help:Sandboxes (5,000 bytes)
16: ...Scene authoring tools|molecular scenes with green links]]) in Proteopedia. - User:Nikhil Malvankar/MB&B 420a-720a 2019 (19,312 bytes)
143: ...dia.org/wiki/index.php/Table_of_Contents Table of Contents].
157: *In the ''Views'' tab, there are 10 links at the top that show you different aspects of the...
272: Include links to supporting references. Wikipedia can be cited,... - Proteopedia:Guidelines for Ethical Writing (9,522 bytes)
9: ...ve text and interactive 3D figures (through green links and widgets in the text). As an author of a Prote...
32: The contents of any page in Proteopedia (or [http://wikipedia....
39: Re-use or adaptation of molecular scenes (green links) initially created by others should be attributed... - Molecular Playground/Authoring (19,935 bytes)
18: ...n about the molecule for a general audience, with links to information in greater depth. The author of th...
84: ...demonstrated above, but are not played with green links.</ref>. Notice also that the chemical element col...
141: You will find links for downloading the scripts on the above-linked p...
165: ...esigned for a general audience of non-scientists. Links to articles in greater depth (possibly within Pro...
201: ...o put several blank lines after it to force the ''Contents'' table down, as done in [[Molecular_Playground/H... - CBI Molecules (13,962 bytes)
2: ...olecular Playground in Proteopedia]]). Follow the links below to read nontechnical descriptions, in Prote...
201: ...ht), and creating a green scene. Explore the HELP links below to learn how to make a green scene. You can...
207: ...lecular Playground/your molecule" and should have links on this CBI Molecule page -- put the new ones fir...
211: ==Links to HELP pages==
212: Overview at [[Help:Contents ]]
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