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- Image:Jbic logo.jpg (24 bytes)
- Journal:JBIC:18 (3,745 bytes)
1: ...size='450' side='right' scene='Journal:JBIC:18/Cv/1' caption=''>
2: ...== Solution structure and dynamics of human S100A14 ===
3: ...ragai and Claudio Luchinat</big> <ref>pmid 23197251 </ref>
6: ...cene name='Journal:JBIC:18/Cv/5'>homodimeric S100A14</scene> (<span style="color:mediumslateblue;back...
8: ...as open and filled grey triangles, respectively. S100 proteins are reported with the same symbols as ... - Journal:JBIC:19 (4,106 bytes)
1: ...ad='' size='450' side='right' scene='Journal:JBIC:19/Cv/3' caption=''>
6: ...4</sub>] heterometallic cluster was determined to 1.95 Å resolution (PBD entry [[4dhv]]), being the ...
7: ...he S – Ag – S <scene name='Journal:JBIC:19/Cv/13'>bond angles</scene> are still close to the expe...
9: ...4</sub>] heterometallic cluster was determined to 1.95 Å resolution, [[4dhv]]. - Journal:JBIC:20 (2,595 bytes)
1: ...on load='' size='450' side='right' scene='Journal:JBIC:20/Cv/2' caption=''>
4: ...rlicki, and Stefano Ciurli</big> <ref>pmid 23412551 </ref>
7: ...Ni and OH are in darkmagenta, of note, His249, His139, and Kcx220<ref>Kcx - Lysine NZ-carboxylic acid... - Journal:JBIC:31 (3,075 bytes)
1: ...ad='' size='450' side='right' scene='69/696899/Cv/1' caption=''>
6: ... both the proximal and distal heme pockets. Group 1 CYTcps typically have a phenylalanine residue pos...
10: ...rance from the aromatic side chain of residue Phe 16. The binding of distal ligands is thus controlle...
11: ...<b>RSCP (''R. sphaeroides''; in red</b></font>; [[1gqa]]) and <span style="color:cyan;background-colo...
12: * <scene name='69/696899/Cv/14'>Click here to see morph of this scene</scene>. - Journal:JBIC:Working (288 bytes)
1: ...ent_in_Proteopedia|Interactive 3D Complement]] to JBIC papers. - Journal:JBIC:1 (3,849 bytes)
1: ...rame="true" spin="on" Scene ="Journal:JBIC:1/Jbic1_opening/2" side="right" caption="Crystal structur...
4: </big> <ref >DOI 10.1007/s00775-010-0700-8</ref>
10: ...</scene> ([[3l0s]]) and <scene name='Journal:JBIC:1/Fe_bound/8'>Fe2+, Fe-AK</scene> ([[3l0p]]) bound ...
11: ...ucture of the enzyme. A <scene name='Journal:JBIC:1/Walker/4'>Walker motif</scene> with conserved seq... - Journal:JBIC:2 (2,050 bytes)
1: ...='right' caption='' scene='Journal:JBIC:2/Opening/1'>
3: ...stanzo, E. Meggers</big> <ref>DOI 10.1007/s00775-010-0699-x</ref>
6: ...and to interact tightly with <scene name='Journal:JBIC:2/Glycine_rich_loop2/4'>the flexible glycine-rich...
8: ... Complex Bound to Glycogen Synthase Kinase 3, [[3m1s]]. - Image:JBIC 1.1.pdb (13 bytes)
1: JBIC 1.1 Jmol - Sandbox 1 JBIC (3,572 bytes)
1: ...rame="true" spin="on" Scene ="Journal:JBIC:1/Jbic1_opening/2" align="right" caption="Crystal structu...
4: </big> <ref >DOI 10.1007/s00775-010-0700-8</ref>
5: ...nbsp; ('''[http://www.ncbi.nlm.nih.gov/pubmed/20821240 Abstract]''')
12: ...rystallography. <scene name='Journal:JBIC:1/Super/10'>All three crystal structures are very similar <...
15: ...ucture of the enzyme. A <scene name='Journal:JBIC:1/Walker/4'>Walker motif</scene> with conserved seq... - Journal:JBIC:4 (2,944 bytes)
1: ...tructure of Ferrochelatase Mutant' scene='Journal:JBIC:4/Heme_bound_ferro_open/3'>
2: === Bacterial ferrochelatase turns human: Tyr13 determines the apparent metal specificity of ''B...
3: ...by • Mats Hansson</big><ref>DOI 10.1007/s00775-010-0720-4</ref>
7: ...5'>other shows</scene> how a <scene name='Journal:JBIC:4/Bound_cu_por/4'>copper in a reaction product (c...
9: ...ochelatase, [[3m4z]]; Crystal structure of the Tyr13Met variant of ''Bacillus subtilis'' ferrochelata... - Journal:JBIC:0 (204 bytes)
- Journal:JBIC:3 (3,108 bytes)
1: ...tion='Solved Structure of S100A16' scene='Journal:JBIC:3/Calcium_binding_start/7'>
2: === Structural characterization of human S100A16, a low-affinity calcium binder ===
3: ...acomo Parigi</big><ref >DOI 10.1007/s00775-010-0721-3</ref>
6: .../scene>. Although the biological function of S100A16 is still unclear yet, these structural and dynam...
8: ... S100A16 [[2l51]]; Solution structure of apo S100A16 [[2l50]]. - Journal:JBIC:5 (4,665 bytes)
1: <StructureSection size="450" scene ="Journal:JBIC:5/Opening/2" caption="Solved Crystal Structure of...
3: ...b and Lawrence Que</big> <ref>DOI 10.1007/s00775-010-0732-0</ref>
6: ...n the <scene name='Journal:JBIC:5/Cobalt_overview/1'>Homoprotocatechuate 2,3-dioxygenase</scene> (2,3...
8: ...e name='Journal:JBIC:5/Substrate_overlay/16'> the 1st or 2nd coordination sphere environment</scene>....
10: ...containing Homoprotocatechuate 2,3-Dioxygenase at 1.70 Ang resolution, [[3ojt]]. - Journal:JBIC:6 (3,666 bytes)
1: <StructureSection size="450" scene ="Journal:JBIC:6/Opening/5" caption="Solved Crystal Structures o...
3: ...i and Shenlin Wang</big> <ref>DOI 10.1007/s00775-010-0735-x</ref>
6: ...ene> and <scene name='Journal:JBIC:6/Cyt_c_openin/1'>cyt c</scene>, separately expressed, were determ...
8: ...name='Journal:JBIC:6/Cu_eukaryotic_cxxxc_hydro_in/1'>freeze the copper binding state</scene> conforma...
10: '''PDB reference:''' Cytochrome c domain of pp3183 protein from ''Pseudomonas putida'', [[2l4d]]. - Journal:JBIC:7 (3,695 bytes)
1: ... color="" frame="true" spin="on" Scene ="Journal:JBIC:7/Cv/2" side="right" caption="Cytochrome c6">
3: ...athan A.R. Worrall</big><ref>DOI 10.1007/s00775-011-0758-y</ref>
6: ...he '''Q51V''' variant has been shown to tune over 100 mV of heme redox potential, which for a single ...
8: ...x</scene> and the <scene name='Journal:JBIC:7/Cv/21'>displacement of two loop regions</scene>.
10: ...t is stabilised by <scene name='Journal:JBIC:7/Cv/15'>imidazole binding to the vacant heme iron coord... - Journal:JBIC:8 (4,944 bytes)
1: ... size='450' side='right' scene='Journal:JBIC:8/Cv/1' caption=''>
2: ...A hydrogen-bonding network formed by the B10-E7-E11 residues of a truncated hemoglobin from Tetrahyme...
3: ...riki Matsuoka</big><ref>DOI 10.1007/s00775-011-0761-3</ref>
6: ...ecies</scene>. Hbs transport <scene name='Journal:JBIC:8/Rabbit_hb/5'>oxygen</scene> in the red blood ce...
8: ...trHb) was first discovered by Keilin and Ryley in 1953. - Journal:JBIC:9 (3,634 bytes)
1: ... size='450' side='right' scene='Journal:JBIC:9/Cv/18' caption=''>
2: ...re of the wheat metallothionein domain γ-Ec-1. The second part of the puzzle. ===
3: ...and Eva Freisinger</big><ref>DOI 10.1007/s00775-011-0770-2</ref>
6: ...oforms</scene> revealed that <scene name='Journal:JBIC:9/Cv2/3'>only small structural adaptations were n...
8: '''PDB references:''' [[2l61]], [[2l62]] - Journal:JBIC:10 (3,536 bytes)
1: ... size='450' side='right' scene='Journal:JBIC:10/Cv1/2' caption=''>
2: ...stal structures of the all cysteinyl coordinated D14C variant of ''Pyrococcus furiosus'' ferredoxin: ...
3: ...nd Pernille Harris</big><ref>DOI 10.1007/s00775-011-0778-7</ref>
6: ...mation</scene> (<scene name='Journal:JBIC:10/Cv1/11'>click to see morph</scene>, molecule A is shown ...
8: ...png|left|300px|thumb|pH dependent equilibrium of D14C [3Fe-4S] ''P. furiosus'' ferredoxin between pro... - Journal:JBIC:11 (3,578 bytes)
1: ...pdb' size='450' side='right' scene='Journal:JBIC:11/Cv/2' caption=''>
3: ...William Lanzilotta</big><ref>DOI 10.1007/s00775-011-0795-6</ref>
8: ... the peroxide binding site</scene>. Movement of E114 upon oxidation of the all-ferrous diiron center ...
9: ...e</scene> also reveals <scene name='Journal:JBIC:11/Exp/4'>small srtuctural changes</scene> ([[3qvd]]...
13: ...(All-ferrous) ''Pyrococcus'' rubrerythrin after a 10 second exposure to peroxide, [[3pza]]; Exposure ...
Page text matches
- Hemoglobin (19,366 bytes)
1: ...pink) β chain (green and yellow) with bound O2 [[1gzx]]" scene="Hemoglobin/Foursubunits/5" >
5: <script> script /scripts/32/32/Subunits_1hho/1.spt;
15: ...lobin monomer from <scene name='32/32/Hemoglobins_1hho/9'>glutamic acid to a valine</scene>. This he...
16: ...hemoglobin''' found in neural tissue and contains 109 residues<ref>PMID:9642264</ref> .
17: ...is with sulfur-oxidizing bacteria<ref>PMID:16204001</ref> . - User:Alexander Grayzel/Sandbox 1 (15,974 bytes)
5: ...l of Biological Inorganic Chemistry 2016, 21 (1), 13–28.</ref> It plays a crucial role in maintain...
8: ... forms in humans: heavy (H, 21 kDa) and light (L, 19 kDa) chains.<ref name="srivastava" /> These two ...
10: ...e, 81, 134–143. https://doi.org/10.1016/j.nbd.2015.02.007</ref> The H-chain posses ferroxidase acti...
17: ...s_of_Chemistry_(Cox)/10%3A_Bioinorganic_Chemistry/10.04%3A_Iron_Storage-_Ferritin</ref> It is lined w...
19: ...xicology, 25(2), 239–251. https://doi.org/10.1021/tx2003257</ref> Fe³⁺ is a hard Lewis acid beca... - User:Alexander Berchansky (31,370 bytes)
1: [[Image:1680.jpg|left|200px]]
9: *[[Mutations in BRCA1/BARD1 RING-domain heterodimer]]
10: *[[Mutations in Brca1 BRCT Domains]]
22: ...8320011869 http://dx.doi.org/10.1107/S2059798320011869]
39: '''CRISPR Class 1 uses a complex of multiple Cas proteins''' - User:Michael Skovbo Windahl (3,860 bytes)
1: [[Image:msw.jpg|right|150px]]
8: 2012-2016 Post doc [http://www.ruc.dk Roskilde University]...
9: 2010-2012 Post doc at [http://www.carlsberglab.dk Carlsber...
10: 2007-2010 Assistant professor at [http://www.igm.life.ku.d...
24: ...10.1016/j.jmb.2014.12.019 J. Mol. Biol. 427, 1263-1277]. - User:Eran Hodis/Sandbox3 (431 bytes)
3: ...Prilusky/How_do_we_get_the_oxygen_we_breathe/Heme/1
6: ...get_the_oxygen_we_breathe/Sickle_hemoglobin_chain/1
9: scene = Journal:JBIC:3/Motif_good/5 - Transferases (2,490 bytes)
22: ...nylate Kinase]] - Interactive 3D Compliment for [[JBIC]]
28: ** [[Hexokinase Type 1]] or See: [[The Structure and Mechanism of Hexoki...
29: ...e Kinase 3ß]] - Interactive 3D Compliment for [[JBIC]] - User:Jaime Prilusky/Links (7,849 bytes)
15: ...ime_Prilusky/Test/3wu2]] Photosystem II complex (21 Ligands)
18: ***[[1ijg]]
19: ***[[6w01]] [[3j3q]] large structures
21: ***[[1ece]] evolutionary conservation
24: *** [[SN1_reaction]] Substitution of Cl- and tert-Butanol - Journal:JBIC:Working (288 bytes)
1: ...ent_in_Proteopedia|Interactive 3D Complement]] to JBIC papers. - Interactive 3D Complements in Proteopedia (7,603 bytes)
8: [[Image:Jbic_logo.jpg|left|120px|]]
9: ...cal_Inorganic_Chemistry|list of I3DC articles for JBIC]].
15: ===2015-Present===
16: * 2021: Structure of Geobacter pili reveals secretory ra...
18: ...rometers. Wang, Gu ''et al., Cell'' <ref>PMID:30951668</ref>, see [[Malvankar/2]]. - Image:JBIC 1.1.pdb (13 bytes)
1: JBIC 1.1 Jmol - Image:Ak zn 2xb4.pdb (12 bytes)
1: JBIC 1. Zinc - Image:Ak fe 3l0p.pdb (10 bytes)
1: JBIC 1. Fe - Image:Only GSK3 plus inhibitor.pdb (11 bytes)
1: JBIC 2 file - User:David Canner/Sandbox Exciting News (1,351 bytes)
5: ==October 1st - Current==
8: ...//www.f1000scientist.com/article/display/57649/ 2010 The Scientist "Best Science Website" Labby Award...
12: ...nd see the [http://onlinelibrary.wiley.com/doi/10.1002/bmb.v38:5/issuetoc Sept/Oct edition of BAMBED]...
15: [[Image:JBIC.jpg|50px|right]]
16: ...s. See [[Journal:JBIC:1|the first]] and [[Journal:JBIC:2|the second]] such Interactive 3D Complements. - User:Jaime Prilusky/Sandbox molshow (3,617 bytes)
1: ...cene name here' /><div style="float:right;padding:10px;">
2: ...c1z/2'>evolutionary conservation</scene> backbone 1.2
5: scene =Sandbox_Reserved_362/Basic/1
8: scene=Sandbox_Reserved_354/Bonds/1
16: <div style="float:right;padding:10px;"> - Ribozyme (1,825 bytes)
5: ...dent Projects for UMass Chemistry 423 Spring 2012-10]].<br />
6: ...Z''' are named based on their shape<ref>PMID:9849614</ref>.<br />
7: ...n''' catalyzes its own selfish splicing<ref>PMID:2197983</ref>.
8: ... '''Pistol''' <ref>PMID:24240507</ref><ref>PMID:26167874 </ref>.
18: *[[Journal:JBIC:24|Human CPEB3 ribozyme's P4 domain]] - Sandbox Reserved 760 (17,273 bytes)
5: <Structure load='1N2C' size='500' frame='true' align='right' caption...
8: ...iochemical puzzle. (2005) J. Bacteriol. 187, 404-414. </ref>
11: ... 8H+ + 16MgATP + 8e− → 2 NH3 + H2 + 16MgADP + 16Pi.
14: ...spectively.<ref>Burris, R. H., Nitrogenases. (1991) J. Biol. Chem. 266,9339-9342. </ref>
15: ...e reaction.<ref>Burris, R. H., Nitrogenases. (1991) J. Biol. Chem. 266,9339-9342. </ref> - Peptidyl-prolyl cis-trans isomerase (2,222 bytes)
1: ...agenta) (PDB code [[1f8a]]).' scene='67/677404/Cv/1'>
5: ... be involved in cancer and Alzheimer Disease. Pin1 consists of 2 domains: the WW domain recognizes t...
7: ...on of macrophages by some parasites<ref>PMID:1379319</ref>.<br />
9: ...ap domain which acts as a chaperone<ref>PMID:22735173</ref>.<br />
15: • [[Journal:JBIC:14|Multifaceted SlyD from Helicobacter pylori: impl... - Proteopedia:Featured JRN/0 (939 bytes)
4: Image:Anim_Journal-JBIC-2_Hydrophobic_interactions.gif|center
5: default [[Journal:JBIC:2]]
9: ...doi.org/10.1007/s00775-010-0699-x 10.1007/s00775-010-0699-x] <br>
12: >>> [[Journal:JBIC:2|Visit this I3DC complement]] >>> - Image:Anim Journal-JBIC-2 Hydrophobic interactions.gif (106 bytes)
2: animated image from Journal-JBIC-2_Hydrophobic_interactions
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