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  1. Image:Jbic logo.jpg (24 bytes)
  2. Journal:JBIC:18 (3,745 bytes)
    1: ...on load='' size='450' side='right' scene='Journal:JBIC:18/Cv/1' caption=''>
    3: ... Fragai and Claudio Luchinat</big> <ref>pmid 23197251 </ref>
    6: ...4. The solution structure of <scene name='Journal:JBIC:18/Cv/5'>homodimeric S100A14</scene> (<span style...
    8: [[Image:JBIC18.png|left|400px|thumb|Principal component analys...
    10: ...n <scene name='Journal:JBIC:18/Cv/6'>helix I (Phe-29) and helix IV (Phe-81, Phe-84, Trp-85)</scene> s...
  3. Journal:JBIC:19 (4,106 bytes)
    1: ...on load='' size='450' side='right' scene='Journal:JBIC:19/Cv/3' caption=''>
    3: ... Hans Erik Mølager Christensen</big><ref >pmid 23296387 </ref>
    7: ... However, the S – Ag – S <scene name='Journal:JBIC:19/Cv/13'>bond angles</scene> are still close to ...
  4. Journal:JBIC:20 (2,595 bytes)
    1: ...size='450' side='right' scene='Journal:JBIC:20/Cv/2' caption=''>
    4: ... Berlicki, and Stefano Ciurli</big> <ref>pmid 23412551 </ref>
    7: ... in darkmagenta, of note, His249, His139, and Kcx220<ref>Kcx - Lysine NZ-carboxylic acid</ref></b></f...
  5. Journal:JBIC:31 (3,075 bytes)
    3: ...l S. Dobbin, Michael A. Hough</big> <ref>PMID 25792378 </ref>
    6: ...wanella frigidimarina'' <scene name='69/696899/Cv/2'>(SFCP)</scene>, a protein that has a distal phen...
    11: ...old;">RGCP (''R. gelatinosus''; in cya)</span>; [[2j8w]]).
  6. Journal:JBIC:Working (288 bytes)
    1: ...ent_in_Proteopedia|Interactive 3D Complement]] to JBIC papers.
  7. Journal:JBIC:1 (3,849 bytes)
    1: ..." spin="on" Scene ="Journal:JBIC:1/Jbic1_opening/2" side="right" caption="Crystal structure of cobal...
    7: ... with high energy turnover: Mg2+ATP + AMP&#8596;Mg2+ADP + ADP.
    10: ...]]) and <scene name='Journal:JBIC:1/Fe_bound/8'>Fe2+, Fe-AK</scene> ([[3l0p]]) bound in its LID domai...
    11: ...y structure of the enzyme. A <scene name='Journal:JBIC:1/Walker/4'>Walker motif</scene> with conserved s...
    13: ... Adenylate kinase from ''Desulfovibrio gigas'', [[2xb4]]; Crystal structure of Iron containing Adenyl...
  8. Journal:JBIC:2 (2,050 bytes)
    1: ...'350' side='right' caption='' scene='Journal:JBIC:2/Opening/1'>
    6: ...with <scene name='Journal:JBIC:2/Glycine_rich_loop2/4'>the flexible glycine-rich loop</scene>. Althou...
  9. Image:JBIC 1.1.pdb (13 bytes)
    1: JBIC 1.1 Jmol
  10. Sandbox 1 JBIC (3,572 bytes)
    1: ..." spin="on" Scene ="Journal:JBIC:1/Jbic1_opening/2" align="right" caption="Crystal structure of coba...
    5: ...bsp; ('''[http://www.ncbi.nlm.nih.gov/pubmed/20821240 Abstract]''')
    9: ... with high energy turnover: Mg2+ATP + AMP&#8596;Mg2+ADP + ADP.
    12: ...ed by X-ray crystallography. <scene name='Journal:JBIC:1/Super/10'>All three crystal structures are very...
    15: ...y structure of the enzyme. A <scene name='Journal:JBIC:1/Walker/4'>Walker motif</scene> with conserved s...
  11. JBIC (30 bytes)
  12. Journal:JBIC:4 (2,944 bytes)
    1: ...tructure of Ferrochelatase Mutant' scene='Journal:JBIC:4/Heme_bound_ferro_open/3'>
    3: ... Mats Hansson</big><ref>DOI 10.1007/s00775-010-0720-4</ref>
    7: ...5'>other shows</scene> how a <scene name='Journal:JBIC:4/Bound_cu_por/4'>copper in a reaction product (c...
  13. Journal:JBIC:0 (204 bytes)
  14. Journal:JBIC:3 (3,108 bytes)
    1: ...tion='Solved Structure of S100A16' scene='Journal:JBIC:3/Calcium_binding_start/7'>
    3: ...iacomo Parigi</big><ref >DOI 10.1007/s00775-010-0721-3</ref>
    6: ...d helix</scene> are the most <scene name='Journal:JBIC:3/Flexible_broad/3'>flexible regions in both the ...
    8: ...A16 [[2l51]]; Solution structure of apo S100A16 [[2l50]].
  15. Journal:JBIC:5 (4,665 bytes)
    1: ...Section size="450" scene ="Journal:JBIC:5/Opening/2" caption="Solved Crystal Structure of Hyperactive...
    3: ...Lawrence Que</big> <ref>DOI 10.1007/s00775-010-0732-0</ref>
    6: ...w/1'>Homoprotocatechuate 2,3-dioxygenase</scene> (2,3-HPCD) from ''Brevibacterium fuscum''.
    8: ...ability of the enzyme to activate molecular O<sub>2</sub> does not correlate with redox potential of ...
    10: ...cture of native Fe-containing Homoprotocatechuate 2,3-Dioxygenase at 1.70 Ang resolution, [[3ojt]].
  16. Journal:JBIC:6 (3,666 bytes)
    1: <StructureSection size="450" scene ="Journal:JBIC:6/Opening/5" caption="Solved Crystal Structures o...
    6: ...g/7'>Sco domains</scene> and <scene name='Journal:JBIC:6/Cyt_c_openin/1'>cyt c</scene>, separately expre...
    8: ...and the conserved His region <scene name='Journal:JBIC:6/Cu_eukaryotic_cxxxc_hydro_in/1'>freeze the copp...
    10: ... of pp3183 protein from ''Pseudomonas putida'', [[2l4d]].
  17. Journal:JBIC:7 (3,695 bytes)
    1: ...frame="true" spin="on" Scene ="Journal:JBIC:7/Cv/2" side="right" caption="Cytochrome c6">
    6: ... determined and all have the <scene name='Journal:JBIC:7/Cv/7'>methionine ligand coordinating to the iro...
    8: ...ix</scene> and the <scene name='Journal:JBIC:7/Cv/21'>displacement of two loop regions</scene>.
    10: ...ediate that is stabilised by <scene name='Journal:JBIC:7/Cv/15'>imidazole binding to the vacant heme iro...
    12: ...dium laminosum'' cytochrome c6 Q51V variant, [[3ph2]].
  18. Journal:JBIC:8 (4,944 bytes)
    1: ...Jbic8.pdb' size='450' side='right' scene='Journal:JBIC:8/Cv/1' caption=''>
    6: ...ecies</scene>. Hbs transport <scene name='Journal:JBIC:8/Rabbit_hb/5'>oxygen</scene> in the red blood ce...
    8: ...1'>Truncated hemoglobins</scene>, also known as 2/2 hemoglobins, can be further classified into three...
    12: ...rthermore, <scene name='Journal:JBIC:8/Trhb/4'>Tyr25 was hydrogen-bonded to the Gln46 and Gln50 (E11)...
    14: ...lues are similar to those of <scene name='Journal:JBIC:8/Hbn/3'>HbN from Mycobacterium tuberculosis</sce...
  19. Journal:JBIC:9 (3,634 bytes)
    1: ...ic91a.pdb' size='450' side='right' scene='Journal:JBIC:9/Cv/18' caption=''>
    3: ... Freisinger</big><ref>DOI 10.1007/s00775-011-0770-2</ref>
    6: ...cene> revealed that <scene name='Journal:JBIC:9/Cv2/3'>only small structural adaptations were necessa...
    8: '''PDB references:''' [[2l61]], [[2l62]]
  20. Journal:JBIC:10 (3,536 bytes)
    1: ...ize='450' side='right' scene='Journal:JBIC:10/Cv1/2' caption=''>
    6: ...single conformation</scene> (<scene name='Journal:JBIC:10/Cv1/11'>click to see morph</scene>, molecule A...
    10: ...e-4S]</scene>) and <scene name='Journal:JBIC:10/Cv2/10'>WT [3Fe-4S]</scene>).

Page text matches

  1. User:Alexander Berchansky (31,370 bytes)
    1: [[Image:1680.jpg|left|200px]]
    13: *[[Journal:Proteins:2|Missense Mutations in Phenylalanine Hydroxylase]]
    22: ...59798320011869 http://dx.doi.org/10.1107/S2059798320011869]
    53: CRISPR type I-F (Csy1, Csy2, Csy3) - see [[CRISPR subtype I-F]]
    75: '''CRISPR Class 2 uses a single large Cas protein'''
  2. User:Michael Skovbo Windahl (3,860 bytes)
    8: 2012-2016 Post doc [http://www.ruc.dk Roskilde Universit...
    9: 2010-2012 Post doc at [http://www.carlsberglab.dk Carlsberg...
    10: 2007-2010 Assistant professor at [http://www.igm.life.ku...
    15: ...t of Chemistry], Technical University of Denmark, 2007. <br/>
    16: ...t of Chemistry], Technical University of Denmark, 2004. <br/>
  3. User:Eran Hodis/Sandbox3 (431 bytes)
    9: scene = Journal:JBIC:3/Motif_good/5
  4. Transferases (2,490 bytes)
    1: [[Image: Methylation sites2.jpg|320px|right|thumb|Sites of Methylation by Methyltran...
    2: ...to a receptor molecule. They are classified as EC 2 under the [[EC Number|EC number]] classification.
    22: ...nylate Kinase]] - Interactive 3D Compliment for [[JBIC]]
    23: ** [[Ca2+/Calmodulin dependent protein kinase]]
    29: ...e Kinase 3ß]] - Interactive 3D Compliment for [[JBIC]]
  5. User:Jaime Prilusky/Links (7,088 bytes)
    10: ...aime_Prilusky/Test/3wu2]] Photosystem II complex (21 Ligands)
    14: ***[[6vxs]] [[6w02]] Ligands
    19: *** [[SN2_reaction]] Substitution of chloride and methanol
    58: ***[[User:Jaime.Prilusky/Test/2a3i_jmol|2a3i JSmol]]
    59: ***[[User:Jaime.Prilusky/Test/2a3i_molstar|2a3i Mol*]]
  6. Journal:JBIC:Working (288 bytes)
    1: ...ent_in_Proteopedia|Interactive 3D Complement]] to JBIC papers.
  7. Interactive 3D Complements in Proteopedia (7,455 bytes)
    8: [[Image:Jbic_logo.jpg|left|120px|]]
    9: ...cal_Inorganic_Chemistry|list of I3DC articles for JBIC]].
    15: ===2015-Present===
    16: * 2021: Structure of Geobacter pili reveals secretory r...
    17: ... Cell'' <ref>PMID:30951668</ref>, see [[Malvankar/2]].
  8. Image:JBIC 1.1.pdb (13 bytes)
    1: JBIC 1.1 Jmol
  9. Image:Ak zn 2xb4.pdb (12 bytes)
    1: JBIC 1. Zinc
  10. Image:Ak fe 3l0p.pdb (10 bytes)
    1: JBIC 1. Fe
  11. Image:Only GSK3 plus inhibitor.pdb (11 bytes)
    1: JBIC 2 file
  12. User:David Canner/Sandbox Exciting News (1,351 bytes)
    8: ...p://www.f1000scientist.com/article/display/57649/ 2010 The Scientist "Best Science Website" Labby Awa...
    12: ...see the [http://onlinelibrary.wiley.com/doi/10.1002/bmb.v38:5/issuetoc Sept/Oct edition of BAMBED].<b...
    15: [[Image:JBIC.jpg|50px|right]]
    16: ...e [[Journal:JBIC:1|the first]] and [[Journal:JBIC:2|the second]] such Interactive 3D Complements.
    19: <div align="center"><big>See [[Proteopedia:What%27s_New|What's New]] for additional information.</b...
  13. User:Jaime Prilusky/Sandbox molshow (3,617 bytes)
    2: ...z/2'>evolutionary conservation</scene> backbone 1.2
    5: scene =Sandbox_Reserved_362/Basic/1
    6: caption=Sandbox_Reserved_362/Basic
    25: scene = Journal:JBIC:3/Motif_good/5
  14. Ribozyme (1,825 bytes)
    3: ...le which catalyzes a chemical reaction<ref>PMID:9224568</ref>.<br />
    5: ...tudent Projects for UMass Chemistry 423 Spring 2012-10]].<br />
    7: ...on''' catalyzes its own selfish splicing<ref>PMID:2197983</ref>.
    8: ...d '''Pistol''' <ref>PMID:24240507</ref><ref>PMID:26167874 </ref>.
    18: *[[Journal:JBIC:24|Human CPEB3 ribozyme's P4 domain]]
  15. Proteopedia:I3DC (78,583 bytes)
    4: ...107/S2059798318000050 https://dx.doi.org/10.1107/S2059798318000050]
    5: ...107/S2059798318014900 https://dx.doi.org/10.1107/S2059798318014900]
    6: ...015322 https://dx.doi.org/10.1107/S2059798318015322]
    7: ...107/S2059798318017047 https://dx.doi.org/10.1107/S2059798318017047]
    8: ...19000214 https://dx.doi.org/10.1107/S2059798319000214]
  16. Sandbox Reserved 760 (17,273 bytes)
    5: <Structure load='1N2C' size='500' frame='true' align='right' caption='...
    8: ... Maturation of Nitrogenase:a biochemical puzzle. (2005) J. Bacteriol. 187, 404-414. </ref>
    9: ...nase is an enzyme (protein) that fixes nitrogen (N2) from the atmosphere into ammonia (NH3). This enz...
    11: ...reaction: N2 + 8H+ + 16MgATP + 8e− → 2 NH3 + H2 + 16MgADP + 16Pi.
    13: ...e of the enzyme along with 8hydrogen ions to form 2 ammonia molecules and a by-product of hydrogen. T...
  17. Peptidyl-prolyl cis-trans isomerase (2,222 bytes)
    5: ...n cancer and Alzheimer Disease. Pin1 consists of 2 domains: the WW domain recognizes the pSer/pThr P...
    9: ...n-flap domain which acts as a chaperone<ref>PMID:22735173</ref>.<br />
    15: • [[Journal:JBIC:14|Multifaceted SlyD from Helicobacter pylori: im...
    18: ...cer and age-related macular degeneration<ref>PMID:25986561</ref>.
    21: ...s with the WW domain of PPIase Pin1<ref>PMID:10922246</ref>. <scene name='67/677404/Cv/4'>The phospho...
  18. Proteopedia:Featured JRN/0 (939 bytes)
    4: Image:Anim_Journal-JBIC-2_Hydrophobic_interactions.gif|center
    5: default [[Journal:JBIC:2]]
    9: ...n, L Di Costanzo, E Meggers''. J Biol Inorg Chem. 2010 doi: [http://dx.doi.org/10.1007/s00775-010-069...
    12: >>> [[Journal:JBIC:2|Visit this I3DC complement]] >>>
  19. Image:Anim Journal-JBIC-2 Hydrophobic interactions.gif (106 bytes)
    2: animated image from Journal-JBIC-2_Hydrophobic_interactions
  20. Hemeproteins (30,519 bytes)
    1: ...ad='Cytc6.pdb' size='400' side='right' scene='82/828363/Cv/1' caption=''>
    8: ...hrome b5</scene> (PDB entry [[1b5m]]<ref>PMID:8973214</ref>) is shown.
    17: ... thioether) and <scene name='49/490879/Cv/17'>Fe2S2</scene>. <ref>PMID:16034531</ref>
    22: ... determined and all have the <scene name='Journal:JBIC:7/Cv/7'>methionine ligand coordinating to the iro...
    24: ...ix</scene> and the <scene name='Journal:JBIC:7/Cv/21'>displacement of two loop regions</scene>.

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