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- Image:Jbic logo.jpg (24 bytes)
- Journal:JBIC:18 (3,745 bytes)
1: ...on load='' size='450' side='right' scene='Journal:JBIC:18/Cv/1' caption=''>
3: ...Fragai and Claudio Luchinat</big> <ref>pmid 23197251 </ref>
6: ...tion structure of <scene name='Journal:JBIC:18/Cv/5'>homodimeric S100A14</scene> (<span style="color:...
8: [[Image:JBIC18.png|left|400px|thumb|Principal component analys...
10: ...lix I (Phe-29) and helix IV (Phe-81, Phe-84, Trp-85)</scene> stabilize the interhelical orientation - Journal:JBIC:19 (4,106 bytes)
1: ...on load='' size='450' side='right' scene='Journal:JBIC:19/Cv/3' caption=''>
6: ...sub>] heterometallic cluster was determined to 1.95 Å resolution (PBD entry [[4dhv]]), being the fir...
7: ... However, the S – Ag – S <scene name='Journal:JBIC:19/Cv/13'>bond angles</scene> are still close to ...
9: ...sub>] heterometallic cluster was determined to 1.95 Å resolution, [[4dhv]]. - Journal:JBIC:20 (2,595 bytes)
1: ...on load='' size='450' side='right' scene='Journal:JBIC:20/Cv/2' caption=''>
4: ...erlicki, and Stefano Ciurli</big> <ref>pmid 23412551 </ref>
7: ...te are in yellow</span>. The <scene name='Journal:JBIC:20/Cv/9'>citrate ligand has a significantly exten... - Journal:JBIC:31 (3,075 bytes)
1: <StructureSection load='' size='450' side='right' scene='69/696899/Cv/1' caption=''>
3: ...Paul S. Dobbin, Michael A. Hough</big> <ref>PMID 25792378 </ref>
8: * <scene name='69/696899/Cv/5'>Proximal NO complex of SFCP (monomer A)</scene>.
13: Only a proximal 5-coordinate NO adduct, confirmed by structural dat...
15: '''PDB references:''' The 5-coordinate proximal NO complex of cytochrome c pr... - Journal:JBIC:Working (288 bytes)
1: ...ent_in_Proteopedia|Interactive 3D Complement]] to JBIC papers. - Journal:JBIC:1 (3,849 bytes)
1: ..."" frame="true" spin="on" Scene ="Journal:JBIC:1/Jbic1_opening/2" side="right" caption="Crystal structu...
4: </big> <ref >DOI 10.1007/s00775-010-0700-8</ref>
7: ...g2+AMP with high energy turnover: Mg2+ATP + AMP↔Mg2+ADP + ADP.
10: ...Co-AK</scene> ([[3l0s]]) and <scene name='Journal:JBIC:1/Fe_bound/8'>Fe2+, Fe-AK</scene> ([[3l0p]]) boun...
11: ...y structure of the enzyme. A <scene name='Journal:JBIC:1/Walker/4'>Walker motif</scene> with conserved s... - Journal:JBIC:2 (2,050 bytes)
1: ...size='350' side='right' caption='' scene='Journal:JBIC:2/Opening/1'>
3: ... Costanzo, E. Meggers</big> <ref>DOI 10.1007/s00775-010-0699-x</ref>
6: ...and to interact tightly with <scene name='Journal:JBIC:2/Glycine_rich_loop2/4'>the flexible glycine-rich... - Image:JBIC 1.1.pdb (13 bytes)
1: JBIC 1.1 Jmol - Sandbox 1 JBIC (3,572 bytes)
1: ..."" frame="true" spin="on" Scene ="Journal:JBIC:1/Jbic1_opening/2" align="right" caption="Crystal struct...
4: </big> <ref >DOI 10.1007/s00775-010-0700-8</ref>
9: ...g2+AMP with high energy turnover: Mg2+ATP + AMP↔Mg2+ADP + ADP.
12: ...ed by X-ray crystallography. <scene name='Journal:JBIC:1/Super/10'>All three crystal structures are very...
15: ...y structure of the enzyme. A <scene name='Journal:JBIC:1/Walker/4'>Walker motif</scene> with conserved s... - Journal:JBIC:4 (2,944 bytes)
1: ...tructure of Ferrochelatase Mutant' scene='Journal:JBIC:4/Heme_bound_ferro_open/3'>
3: ...Rigby • Mats Hansson</big><ref>DOI 10.1007/s00775-010-0720-4</ref>
7: ...5'>other shows</scene> how a <scene name='Journal:JBIC:4/Bound_cu_por/4'>copper in a reaction product (c... - Journal:JBIC:0 (204 bytes)
1: <StructureSection load='' size='450' side='right' scene='' caption=''> - Journal:JBIC:3 (3,108 bytes)
1: ...tion='Solved Structure of S100A16' scene='Journal:JBIC:3/Calcium_binding_start/7'>
3: ...at • Giacomo Parigi</big><ref >DOI 10.1007/s00775-010-0721-3</ref>
6: ...d helix</scene> are the most <scene name='Journal:JBIC:3/Flexible_broad/3'>flexible regions in both the ...
8: ...6 [[2l51]]; Solution structure of apo S100A16 [[2l50]]. - Journal:JBIC:5 (4,665 bytes)
1: <StructureSection size="450" scene ="Journal:JBIC:5/Opening/2" caption="Solved Crystal Structure of H...
3: ...comb and Lawrence Que</big> <ref>DOI 10.1007/s00775-010-0732-0</ref>
6: ...o(II) for Fe(II) in the <scene name='Journal:JBIC:5/Cobalt_overview/1'>Homoprotocatechuate 2,3-dioxyg...
8: ... active site residues in<scene name='Journal:JBIC:5/Substrate_overlay/16'> the 1st or 2nd coordinatio...
10: ...tituted Homoprotocatechuate 2,3-Dioxygenase at 1.65 Ang resolution, [[3ojn]]; Structure of native Fe-... - Journal:JBIC:6 (3,666 bytes)
1: ...Section size="450" scene ="Journal:JBIC:6/Opening/5" caption="Solved Crystal Structures of Sco and Cy...
3: ...Shenlin Wang</big> <ref>DOI 10.1007/s00775-010-0735-x</ref>
6: ...g/7'>Sco domains</scene> and <scene name='Journal:JBIC:6/Cyt_c_openin/1'>cyt c</scene>, separately expre...
8: ...and the conserved His region <scene name='Journal:JBIC:6/Cu_eukaryotic_cxxxc_hydro_in/1'>freeze the copp... - Journal:JBIC:7 (3,695 bytes)
1: ... color="" frame="true" spin="on" Scene ="Journal:JBIC:7/Cv/2" side="right" caption="Cytochrome c6">
3: ...n A.R. Worrall</big><ref>DOI 10.1007/s00775-011-0758-y</ref>
6: ... the cytochrome ''c''<sub>6</sub> family. The '''Q51V''' variant has been shown to tune over 100 mV o...
8: ... alpha helix</scene> and the <scene name='Journal:JBIC:7/Cv/21'>displacement of two loop regions</scene>...
10: ... is stabilised by <scene name='Journal:JBIC:7/Cv/15'>imidazole binding to the vacant heme iron coordi... - Journal:JBIC:8 (4,944 bytes)
1: ...Jbic8.pdb' size='450' side='right' scene='Journal:JBIC:8/Cv/1' caption=''>
3: ...shi and Ariki Matsuoka</big><ref>DOI 10.1007/s00775-011-0761-3</ref>
6: ...s transport <scene name='Journal:JBIC:8/Rabbit_hb/5'>oxygen</scene> in the red blood cells of higher ...
8: ...Hb) was first discovered by Keilin and Ryley in 1953.
12: .../4'>Tyr25 was hydrogen-bonded to the Gln46 and Gln50 (E11) residues</scene>. - Journal:JBIC:9 (3,634 bytes)
1: ...ic91a.pdb' size='450' side='right' scene='Journal:JBIC:9/Cv/18' caption=''>
3: ...rbe and Eva Freisinger</big><ref>DOI 10.1007/s00775-011-0770-2</ref>
6: ...oforms</scene> revealed that <scene name='Journal:JBIC:9/Cv2/3'>only small structural adaptations were n... - Journal:JBIC:10 (3,536 bytes)
1: ...oad='2z8q' size='450' side='right' scene='Journal:JBIC:10/Cv1/2' caption=''>
3: ...en and Pernille Harris</big><ref>DOI 10.1007/s00775-011-0778-7</ref>
6: ...single conformation</scene> (<scene name='Journal:JBIC:10/Cv1/11'>click to see morph</scene>, molecule A...
10: ...'>D14C [3Fe-4S]</scene>) and <scene name='Journal:JBIC:10/Cv2/10'>WT [3Fe-4S]</scene>). - Journal:JBIC:11 (3,578 bytes)
1: ...Jb11b.pdb' size='450' side='right' scene='Journal:JBIC:11/Cv/2' caption=''>
3: ...am Lanzilotta</big><ref>DOI 10.1007/s00775-011-0795-6</ref>
8: ...n)</b></font>. This exposure <scene name='Journal:JBIC:11/Cv/9'>causes significant conformational change...
9: ...plosure</scene> also reveals <scene name='Journal:JBIC:11/Exp/4'>small srtuctural changes</scene> ([[3qv...
Page text matches
- Hemoglobin (19,234 bytes)
1: ...ture of HbII- oxy [[3P31]]" scene="Hemoglobinits/5" >
9: ...bunits <scene name='Hemoglobin/Bbsubunitswithheme/5'>contains a heme</scene> prosthetic group. The <s...
13: <scene name='Hemoglobin/Anchortrace/5'>Anchoring of the heme</scene> is facilitated by ...
18: ...ucture vs the 3-on-3 of other Hbs<ref>PMID:11696555</ref> .
32: ...deepskyblue T-state (deoxy) form</span>, with the 5-coordinate, high-spin <span style="color:orange;b... - User:Alexander Grayzel/Sandbox 1 (15,974 bytes)
5: ... iron when needed. Its ability to contain up to 4,500 iron atoms within a spherical protein shell pro...
8: ... Rep 13, 19862 (2023). https://doi.org/10.1038/s41598-023-46880-9</ref> These subunits exist in two p...
10: ...leation and mineralization. Subunits share about 55% sequence identity.<ref name="Levi" /> Iron chann...
17: ...56–2263. https://doi.org/10.1016/S0006-3495(03)75031-0</ref> As stated previously, the 3-fold chann...
19: ... 25(2), 239–251. https://doi.org/10.1021/tx2003257</ref> Fe³⁺ is a hard Lewis acid because it is... - User:Alexander Berchansky (31,370 bytes)
22: ...07/S2059798320011869 http://dx.doi.org/10.1107/S2059798320011869]
55: CRISPR type I-U (GSU0054)
88: ...udies of RoAb13 bound to PIYDIN, a part of the CCR5 N-terminal domain]]
89: *[[Journal:Acta Cryst F:S2053230X20016015|Using Yeast Surface Display to Engineer a Soluble...
90: *[[Journal:Acta Cryst D:S2059798320015004|The substrate binding in the bile acid transpo... - User:Michael Skovbo Windahl (3,860 bytes)
1: [[Image:msw.jpg|right|150px]]
24: ...h debranching enzyme barley limit dextrinase, (2015) [http://dx.doi.org/10.1016/j.jmb.2014.12.019 J. ...
27: ...0.1074/jbc.M114.624163 J. Biol. Chem. 290, 2444-2454].
29: ...ww.proteopedia.org/wiki/index.php/Journal:JBIC:10 JBIC page in Proteopediea.]
33: ...substrate, (2008) [http://dx.doi.org/10.1021/bi8015263 Biochemistry 47, 12087 – 12094]. <font color... - User:Eran Hodis/Sandbox3 (431 bytes)
1: <molshow refresh="50" size=300>
9: scene = Journal:JBIC:3/Motif_good/5 - Transferases (2,490 bytes)
22: ...nylate Kinase]] - Interactive 3D Compliment for [[JBIC]]
29: ...e Kinase 3ß]] - Interactive 3D Compliment for [[JBIC]] - User:Jaime Prilusky/Links (7,849 bytes)
11: ***[[User:Jaime_Prilusky/Test/5ire]] Cryo-EM structure of Zika Virus
17: ***[[5ijc]]
62: ***[[User:Jaime.Prilusky/Test/html5media html5media]]
89: ***[[User:Jaime_Prilusky/Test/5jpq]]
91: ***[[User:Jaime_Prilusky/Test/5ire]] Cryo-EM structure of Zika Virus - Journal:JBIC:Working (288 bytes)
1: ...ent_in_Proteopedia|Interactive 3D Complement]] to JBIC papers. - Interactive 3D Complements in Proteopedia (7,603 bytes)
8: [[Image:Jbic_logo.jpg|left|120px|]]
9: ...cal_Inorganic_Chemistry|list of I3DC articles for JBIC]].
15: ===2015-Present===
18: ...crometers. Wang, Gu ''et al., Cell'' <ref>PMID:30951668</ref>, see [[Malvankar/2]].
19: ...Biology'' <ref>PMID:29078764</ref>, see [[Samatey/5]]. - Image:JBIC 1.1.pdb (13 bytes)
1: JBIC 1.1 Jmol - Image:Ak zn 2xb4.pdb (12 bytes)
1: JBIC 1. Zinc - Image:Ak fe 3l0p.pdb (10 bytes)
1: JBIC 1. Fe - Image:Only GSK3 plus inhibitor.pdb (11 bytes)
1: JBIC 2 file - User:David Canner/Sandbox Exciting News (1,351 bytes)
7: [[Image:Labbies.png|50px|right]]
8: ...he [http://www.f1000scientist.com/article/display/57649/ 2010 The Scientist "Best Science Website" La...
11: [[Image:BAMBED.gif|50px|right]]
12: ...ttp://onlinelibrary.wiley.com/doi/10.1002/bmb.v38:5/issuetoc Sept/Oct edition of BAMBED].<br/>
15: [[Image:JBIC.jpg|50px|right]] - User:Jaime Prilusky/Sandbox molshow (3,617 bytes)
1: <Structure load='' size='350' frame='true' align='right' caption='Insert capt...
2: 2c1z <scene name='42/425176/2c1z/2'>evolutionary conservation</scene> back...
3: <molshow refresh="5" size=300>
8: scene=Sandbox_Reserved_354/Bonds/1
9: caption=Sandbox_Reserved_354/Bonds - Ribozyme (1,825 bytes)
1: <StructureSection load='' size='350' scene='Ribozyme/Cv/3' side='right' caption='Ha...
3: ... which catalyzes a chemical reaction<ref>PMID:9224568</ref>.<br />
8: ... '''Hatchet''', and '''Pistol''' <ref>PMID:24240507</ref><ref>PMID:26167874 </ref>.
18: *[[Journal:JBIC:24|Human CPEB3 ribozyme's P4 domain]] - Sandbox Reserved 760 (17,273 bytes)
2: {{User:Michael_B._Goshe/Template_BCH455_555}}
5: <Structure load='1N2C' size='500' frame='true' align='right' caption='3D image o...
8: ...turation of Nitrogenase:a biochemical puzzle. (2005) J. Bacteriol. 187, 404-414. </ref>
27: ...idues,FeMo protein: alpha: 492 residues and beta: 523 residues
29: ...ght''': Fe protein:63.662 KDa, FeMo protein: 235.154KDa - Peptidyl-prolyl cis-trans isomerase (2,222 bytes)
1: <StructureSection load='' size='350' side='right' caption='Human PPIase (green) comp...
9: ...lap domain which acts as a chaperone<ref>PMID:22735173</ref>.<br />
13: • [[FK506 binding protein]] for SlyD<br />
15: • [[Journal:JBIC:14|Multifaceted SlyD from Helicobacter pylori: im...
18: ...nd age-related macular degeneration<ref>PMID:25986561</ref>. - Proteopedia:Featured JRN/0 (939 bytes)
4: Image:Anim_Journal-JBIC-2_Hydrophobic_interactions.gif|center
5: default [[Journal:JBIC:2]]
9: ...dx.doi.org/10.1007/s00775-010-0699-x 10.1007/s00775-010-0699-x] <br>
12: >>> [[Journal:JBIC:2|Visit this I3DC complement]] >>> - Image:Anim Journal-JBIC-2 Hydrophobic interactions.gif (106 bytes)
2: animated image from Journal-JBIC-2_Hydrophobic_interactions
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