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- Image:Jbic logo.jpg (24 bytes)
- Journal:JBIC:18 (3,745 bytes)
1: ...on load='' size='450' side='right' scene='Journal:JBIC:18/Cv/1' caption=''>
3: ...co Fragai and Claudio Luchinat</big> <ref>pmid 23197251 </ref>
6: ...4. The solution structure of <scene name='Journal:JBIC:18/Cv/5'>homodimeric S100A14</scene> (<span style...
8: ...e others correspond to the apo form of calbindin D9k (Cb) and S100A10 (A10). The filled circle placed...
10: ... <scene name='Journal:JBIC:18/Cv/6'>helix I (Phe-29) and helix IV (Phe-81, Phe-84, Trp-85)</scene> st... - Journal:JBIC:19 (4,106 bytes)
1: ...d='' size='450' side='right' scene='Journal:JBIC:19/Cv/3' caption=''>
3: ...Hans Erik Mølager Christensen</big><ref >pmid 23296387 </ref>
6: .../sub>] heterometallic cluster was determined to 1.95 Å resolution (PBD entry [[4dhv]]), being the fi...
7: ...nd angles</scene> are still close to the expected 90° for a primitive cubic system.
9: .../sub>] heterometallic cluster was determined to 1.95 Å resolution, [[4dhv]]. - Journal:JBIC:20 (2,595 bytes)
1: ...on load='' size='450' side='right' scene='Journal:JBIC:20/Cv/2' caption=''>
7: ... and OH are in darkmagenta, of note, His249, His139, and Kcx220<ref>Kcx - Lysine NZ-carboxylic acid</... - Journal:JBIC:31 (3,075 bytes)
1: ...on load='' size='450' side='right' scene='69/696899/Cv/1' caption=''>
3: ...ul S. Dobbin, Michael A. Hough</big> <ref>PMID 25792378 </ref>
6: ...eme group in yellow</span>). <scene name='69/696899/Cv/3'>Each monomer of the SFCP dimer folds as a 4...
7: * <scene name='69/696899/Cv/4'>Heme group and its environment in as-isolat...
8: * <scene name='69/696899/Cv/5'>Proximal NO complex of SFCP (monomer A)</sc... - Journal:JBIC:Working (288 bytes)
1: ...ent_in_Proteopedia|Interactive 3D Complement]] to JBIC papers. - Journal:JBIC:1 (3,849 bytes)
1: ..."" frame="true" spin="on" Scene ="Journal:JBIC:1/Jbic1_opening/2" side="right" caption="Crystal structu...
7: ...2+AMP with high energy turnover: Mg2+ATP + AMP↔Mg2+ADP + ADP.
10: ...Co-AK</scene> ([[3l0s]]) and <scene name='Journal:JBIC:1/Fe_bound/8'>Fe2+, Fe-AK</scene> ([[3l0p]]) boun...
11: ...y structure of the enzyme. A <scene name='Journal:JBIC:1/Walker/4'>Walker motif</scene> with conserved s... - Journal:JBIC:2 (2,050 bytes)
1: ...size='350' side='right' caption='' scene='Journal:JBIC:2/Opening/1'>
3: ..., E. Meggers</big> <ref>DOI 10.1007/s00775-010-0699-x</ref>
6: ...and to interact tightly with <scene name='Journal:JBIC:2/Glycine_rich_loop2/4'>the flexible glycine-rich... - Image:JBIC 1.1.pdb (13 bytes)
1: JBIC 1.1 Jmol - Sandbox 1 JBIC (3,572 bytes)
1: ..."" frame="true" spin="on" Scene ="Journal:JBIC:1/Jbic1_opening/2" align="right" caption="Crystal struct...
9: ...2+AMP with high energy turnover: Mg2+ATP + AMP↔Mg2+ADP + ADP.
12: ...ed by X-ray crystallography. <scene name='Journal:JBIC:1/Super/10'>All three crystal structures are very...
15: ...y structure of the enzyme. A <scene name='Journal:JBIC:1/Walker/4'>Walker motif</scene> with conserved s... - Journal:JBIC:4 (2,944 bytes)
1: ...tructure of Ferrochelatase Mutant' scene='Journal:JBIC:4/Heme_bound_ferro_open/3'>
7: ...5'>other shows</scene> how a <scene name='Journal:JBIC:4/Bound_cu_por/4'>copper in a reaction product (c... - Journal:JBIC:0 (204 bytes)
- Journal:JBIC:3 (3,108 bytes)
1: ...tion='Solved Structure of S100A16' scene='Journal:JBIC:3/Calcium_binding_start/7'>
6: ...d helix</scene> are the most <scene name='Journal:JBIC:3/Flexible_broad/3'>flexible regions in both the ... - Journal:JBIC:5 (4,665 bytes)
1: <StructureSection size="450" scene ="Journal:JBIC:5/Opening/2" caption="Solved Crystal Structure of...
6: ...ing Co(II) for Fe(II) in the <scene name='Journal:JBIC:5/Cobalt_overview/1'>Homoprotocatechuate 2,3-diox...
8: ...f the active site residues in<scene name='Journal:JBIC:5/Substrate_overlay/16'> the 1st or 2nd coordinat... - Journal:JBIC:6 (3,666 bytes)
1: <StructureSection size="450" scene ="Journal:JBIC:6/Opening/5" caption="Solved Crystal Structures o...
6: ...g/7'>Sco domains</scene> and <scene name='Journal:JBIC:6/Cyt_c_openin/1'>cyt c</scene>, separately expre...
8: ...and the conserved His region <scene name='Journal:JBIC:6/Cu_eukaryotic_cxxxc_hydro_in/1'>freeze the copp... - Journal:JBIC:7 (3,695 bytes)
1: ... color="" frame="true" spin="on" Scene ="Journal:JBIC:7/Cv/2" side="right" caption="Cytochrome c6">
6: ... determined and all have the <scene name='Journal:JBIC:7/Cv/7'>methionine ligand coordinating to the iro...
8: ... alpha helix</scene> and the <scene name='Journal:JBIC:7/Cv/21'>displacement of two loop regions</scene>...
10: ...ediate that is stabilised by <scene name='Journal:JBIC:7/Cv/15'>imidazole binding to the vacant heme iro... - Journal:JBIC:8 (4,944 bytes)
1: ...Jbic8.pdb' size='450' side='right' scene='Journal:JBIC:8/Cv/1' caption=''>
6: ...ecies</scene>. Hbs transport <scene name='Journal:JBIC:8/Rabbit_hb/5'>oxygen</scene> in the red blood ce...
8: ...rHb) was first discovered by Keilin and Ryley in 1953.
12: ...al oxygen atom. Furthermore, <scene name='Journal:JBIC:8/Trhb/4'>Tyr25 was hydrogen-bonded to the Gln46 ...
14: ...lues are similar to those of <scene name='Journal:JBIC:8/Hbn/3'>HbN from Mycobacterium tuberculosis</sce... - Journal:JBIC:9 (3,634 bytes)
1: ....pdb' size='450' side='right' scene='Journal:JBIC:9/Cv/18' caption=''>
6: ...s</scene> revealed that <scene name='Journal:JBIC:9/Cv2/3'>only small structural adaptations were nec... - Journal:JBIC:10 (3,536 bytes)
1: ...oad='2z8q' size='450' side='right' scene='Journal:JBIC:10/Cv1/2' caption=''>
6: ...single conformation</scene> (<scene name='Journal:JBIC:10/Cv1/11'>click to see morph</scene>, molecule A...
10: ...'>D14C [3Fe-4S]</scene>) and <scene name='Journal:JBIC:10/Cv2/10'>WT [3Fe-4S]</scene>). - Journal:JBIC:11 (3,578 bytes)
1: ...Jb11b.pdb' size='450' side='right' scene='Journal:JBIC:11/Cv/2' caption=''>
3: ...iam Lanzilotta</big><ref>DOI 10.1007/s00775-011-0795-6</ref>
8: ...t>. This exposure <scene name='Journal:JBIC:11/Cv/9'>causes significant conformational changes of res...
9: ...plosure</scene> also reveals <scene name='Journal:JBIC:11/Exp/4'>small srtuctural changes</scene> ([[3qv...
Page text matches
- Hemoglobin (19,234 bytes)
9: ...ach other across a <scene name='Hemoglobin/Cavity/9'>cavity</scene> at the center of the molecule. Ea...
11: ...contains one <scene name='Hemoglobin/Deoxyheme_fe/9'>Fe2+</scene> atom. In the lungs, where oxygen is...
15: ... monomer from <scene name='32/32/Hemoglobins_1hho/9'>glutamic acid to a valine</scene>. This hemoglo...
16: ... neural tissue and contains 109 residues<ref>PMID:9642264</ref> .
18: ... structure vs the 3-on-3 of other Hbs<ref>PMID:11696555</ref> . - User:Alexander Grayzel/Sandbox 1 (15,974 bytes)
2: <StructureSection load='3kx9' size='340' side='right' caption='Caption for thi...
5: ..., G. R. Ferritins: Furnishing Proteins with Iron. JBIC Journal of Biological Inorganic Chemistry 2016, 2...
8: ...forms in humans: heavy (H, 21 kDa) and light (L, 19 kDa) chains.<ref name="srivastava" /> These two c...
17: ...ore. On the other hand, the <scene name='10/1078819/4-fold_channel_of_ferritin/2'>4-fold channels</sc...
19: ...ctions. Chemical research in toxicology, 25(2), 239–251. https://doi.org/10.1021/tx2003257</ref> Fe... - User:Alexander Berchansky (31,370 bytes)
22: ...0011869 http://dx.doi.org/10.1107/S2059798320011869]
35: *[[CRISPR-Cas9]]
77: CRISPR type II-A - see [[CRISPR-Cas9]]
90: *[[Journal:Acta Cryst D:S2059798320015004|The substrate binding in the bile acid ...
91: *[[Journal:Acta Cryst D:S205979832001517X|An engineered disulfide bridge traps an... - User:Michael Skovbo Windahl (3,860 bytes)
24: ...(2015) [http://dx.doi.org/10.1016/j.jmb.2014.12.019 J. Mol. Biol. 427, 1263-1277].
27: ...x.doi.org/10.1074/jbc.M114.624163 J. Biol. Chem. 290, 2444-2454].
29: ...ww.proteopedia.org/wiki/index.php/Journal:JBIC:10 JBIC page in Proteopediea.]
31: ...rms, (2009) [http://dx.doi.org/10.1007/s10930-009-9207-y The Protein Journal 28, 400-406.]
33: ...g/10.1021/bi8015263 Biochemistry 47, 12087 – 12094]. <font color='red'>See my Proteopedia presentat... - User:Eran Hodis/Sandbox3 (431 bytes)
9: scene = Journal:JBIC:3/Motif_good/5 - Transferases (2,490 bytes)
20: ** [[User:Karl E. Zahn/RB69 DNA polymerase (GP43)|DNA Polymerase Structure]]
22: ...nylate Kinase]] - Interactive 3D Compliment for [[JBIC]]
29: ...e Kinase 3ß]] - Interactive 3D Compliment for [[JBIC]] - User:Jaime Prilusky/Links (7,849 bytes)
10: ***[[User:Jaime_Prilusky/Test/3jb9]] Cryo-EM structure of the yeast spliceosome
14: ***[[User:Jaime_Prilusky/Test/4v99]] Panicum Mosaic Virus
16: *** [[9n6k]] prot-dna, interesting structure
82: ...[http://proteopedia.org/cgi-bin/SATMolstar?id=839292 SATMol*]
93: ***[[User:Jaime_Prilusky/Test/3jb9]] Cryo-EM structure of the yeast spliceosome - Journal:JBIC:Working (288 bytes)
1: ...ent_in_Proteopedia|Interactive 3D Complement]] to JBIC papers. - Interactive 3D Complements in Proteopedia (7,603 bytes)
8: [[Image:Jbic_logo.jpg|left|120px|]]
9: ...cal_Inorganic_Chemistry|list of I3DC articles for JBIC]].
18: ...icrometers. Wang, Gu ''et al., Cell'' <ref>PMID:30951668</ref>, see [[Malvankar/2]].
19: ...ok. Barker ''et al.'', ''BMC Biology'' <ref>PMID:29078764</ref>, see [[Samatey/5]].
21: ...et al.'', ''Nature Communications''<ref>PMID:27811912</ref>, see [[Samatey/4]]. - Image:JBIC 1.1.pdb (13 bytes)
1: JBIC 1.1 Jmol - Image:Ak zn 2xb4.pdb (12 bytes)
1: JBIC 1. Zinc - Image:Ak fe 3l0p.pdb (10 bytes)
1: JBIC 1. Fe - Image:Only GSK3 plus inhibitor.pdb (11 bytes)
1: JBIC 2 file - User:David Canner/Sandbox Exciting News (1,351 bytes)
8: ...http://www.f1000scientist.com/article/display/57649/ 2010 The Scientist "Best Science Website" Labby ...
15: [[Image:JBIC.jpg|50px|right]]
16: ...s. See [[Journal:JBIC:1|the first]] and [[Journal:JBIC:2|the second]] such Interactive 3D Complements. - User:Jaime Prilusky/Sandbox molshow (3,617 bytes)
25: scene = Journal:JBIC:3/Motif_good/5 - Ribozyme (1,825 bytes)
1: ...'right' caption='Hammerhead ribozyme, (PDB-ID [[379d]])'>
3: ...cule which catalyzes a chemical reaction<ref>PMID:9224568</ref>.<br />
6: ... RZ''' are named based on their shape<ref>PMID:9849614</ref>.<br />
7: ...' catalyzes its own selfish splicing<ref>PMID:2197983</ref>.
18: *[[Journal:JBIC:24|Human CPEB3 ribozyme's P4 domain]] - Sandbox Reserved 760 (17,273 bytes)
14: ...H., Nitrogenases. (1991) J. Biol. Chem. 266,9339-9342. </ref>
15: ...H., Nitrogenases. (1991) J. Biol. Chem. 266,9339-9342. </ref>
27: ...': Fe protein: 289 residues,FeMo protein: alpha: 492 residues and beta: 523 residues
33: ...graphy.(2004) The Chinese Academy of Science.46, 392-400. </ref>
34: ...graphy.(2004) The Chinese Academy of Science.46, 392-400. </ref> - Peptidyl-prolyl cis-trans isomerase (2,222 bytes)
7: ...n of macrophages by some parasites<ref>PMID:1379319</ref>.<br />
15: • [[Journal:JBIC:14|Multifaceted SlyD from Helicobacter pylori: im...
18: ...r and age-related macular degeneration<ref>PMID:25986561</ref>.
21: ...acts with the WW domain of PPIase Pin1<ref>PMID:10922246</ref>. <scene name='67/677404/Cv/4'>The phos... - Proteopedia:Featured JRN/0 (939 bytes)
4: Image:Anim_Journal-JBIC-2_Hydrophobic_interactions.gif|center
5: default [[Journal:JBIC:2]]
9: ...g/10.1007/s00775-010-0699-x 10.1007/s00775-010-0699-x] <br>
12: >>> [[Journal:JBIC:2|Visit this I3DC complement]] >>> - Image:Anim Journal-JBIC-2 Hydrophobic interactions.gif (106 bytes)
2: animated image from Journal-JBIC-2_Hydrophobic_interactions
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