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- User:Jennifer Ashtamker (220 bytes)
1: * Full Real Name: Jennifer Ashtamker
7: * City, State/Province, Country: Rehovot, Israel
9: * Field of Expertise or Study:Chemistry - Category:Jennifer, J.M (44 bytes)
1: List of pages with the keyword Jennifer, J.M - User:Jennifer VanAusdall/Sandbox 1 (14,031 bytes)
1: ==APC Superfamily==
3: ...with existing hydropathy plots and other structural studies. <br>
5: ...b1 (of the nucleobase-cation-symport-1 (NCS1) family)<ref> PMID: 19031293 </ref> <br>
7: ...aryotic origin and have N- and C-terminal hydrophilic extensions.<br>
9: ...hibit broad specificity while others respond to only one or a few substrates. - User:Jennifer Muzyka (58 bytes)
1: Professor of Chemistry, Centre College, Danville, KY 40422 - User:Jennifer Ye (212 bytes)
1: * Full Real Name: Jennifer Ye
7: * City, State/Province, Country: Flushing, New York, USA
9: * Field of Expertise or Study: Health Science - User:Jennifer Wang (232 bytes)
1: * Full Real Name:Jennifer Wang
9: * Field of Expertise or Study:Biochemistry - User:Jennifer VanAusdall (200 bytes)
1: ... at William Jewell College, studying Molecular Biology within the Oxbridge Honors Program. Studied on...
3: [[User:Jennifer VanAusdall/Sandbox 1|Sculpture Yard]] - User:Jennifer Boyd (218 bytes)
1: * Full Real Name: Jennifer Boyd
5: * Institution (NO ABBREVIATIONS): Westfield State University
7: * City, State/Province, Country: Westfield, Massachusetts, USA
9: * Field of Expertise or Study: English - User:Jennifer Taylor (764 bytes)
1: *[[User:Jennifer Taylor/Sandbox 1]]
2: *[[User:Jennifer Taylor/Sandbox 2]]
3: *[[User:Jennifer Taylor/Sandbox 3]]
4: *[[User:Jennifer Taylor/Sandbox 4]]
5: *[[User:Jennifer Taylor/Sandbox 5]] - User:Jennifer Taylor/Sandbox 1 (8,906 bytes)
1: ==YxiM from ''Bacillus subtilis''==
3: <StructureSection load='2o14' size='340' side='right' caption='Struct...
7: ...me='78/787191/2o14_alpha/1'>one dominated by α-helices</scene>, and <scene name='78/787191/2o14_beta...
9: == ''In silico'' Analysis ==
11: ...ctionally similar to those proteins that have similar sequences and structures. - User:Jennifer Taylor/Sandbox 4 (14,445 bytes)
3: <StructureSection load='4q7q' size='340' side='right' caption='Struct...
4: ...e (PSI) launched by the National Institutes of Health (NIH) and therefore exists in Protein Data Bank...
6: ...n lipids to form fatty acids and a glycerol molecule.
11: ...Image:plasmid_Map.png|thumb|left|250px|Figure 1: Plasmid Map of pMCSG73, the expression vector for 4Q...
13: ... between the alpha helices (represented by the coiled strands). - User:Jennifer Taylor/Sandbox 3 (8,148 bytes)
3: <StructureSection load='3H04' size='340' side='right' caption='Here i...
5: ...h.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
8: ...mbinant his-tagged protein was isolated from E. coli.
10: ... how to use ProMOL to analyzes the structural similarities between the active sites of proteins.
13: ...ein to different aspects of other proteins also helped us determine our assay. - User:Jennifer Taylor/Sandbox 7 (5,224 bytes)
1: ==About 4Q7Q:A Hydrolase==
2: <StructureSection load='4q7q' size='340' side='both' caption='Caption...
3: ...edit this page''' to modify. Be careful with the < and > signs.
4: ...h.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
7: ... PFam, Dali, and ProMol, 4Q7Q is believed to be a lipase. - User:Jennifer Taylor/Sandbox 2 (5,048 bytes)
2: ...hydrolase that could be a alpha/beta found in E.Coli.
4: ...s what determines its applicability in certain fields. In this experiment we attempt aid in the effo...
6: ...aption='Insert caption here' scene='Insert optional scene name here' />
10: ...; Lipase. After this analysis we decided to run a Lipase Assay.
14: ...s of 3h04 against pNPB to see if our results were linear and therefore accurate. - User:Jennifer Taylor/Sandbox 5 (13,494 bytes)
2: ...on image of my protein:<scene name='78/787196/2qru_cartoon/2'>2QRU</scene>
3: <StructureSection load='2qru' size='340' side='right' caption='Captio...
5: ==Background and Goal==
6: ...://www.khanacademy.org/science/biology/macromolecules/proteins-and-amino-acids/a/orders-of-protein-st...
8: ... perform sequential, structural, and enzymatic analysis. - User:Jennifer Taylor/Sandbox 6 (11,659 bytes)
2: ...are yet to determine if it can be classified as a lipase.
5: ...ied to do is take one of the protein structures solved by the PSI and characterize its function.
6: <StructureSection load='2qru' size='340' side='right' caption='Captio...
7: == Initial Process ==
8: ...– Elution 2 (14 uL), Lane 15 – Elution 3 (14 uL)] - User:Jennifer Taylor/Sandbox 8 (6,502 bytes)
1: ...'340' side='right' caption='AphB biological Assembly=''>
2: == Instructional Information ==
3: ...64A 052018.jpg|thumb|left|250px|Figure 1: Bacterial Transformation]]
5: ...you should be annotate it with size standards and lane numbers.]]
7: '''Adding an uploaded image into your page - User:Jennifer Taylor/Sandbox 9 MP (302 bytes)
1: ...to control ''Drosophila'' gene expression in Neurology Research) ==
3: <applet size='[450,338]' frame='true' align='right'
6: ...name='80/806397/Gal4_bound_to_uas/1'>Gal4 UAS complex</scene>
9: ...cene name='80/806397/P-nitrophenol/1'>p-nitrophenol</scene> - Category:Jennifer, C L (44 bytes)
1: List of pages with the keyword Jennifer, C L - Category:Jennifer CL (42 bytes)
1: List of pages with the keyword Jennifer CL
Page text matches
- Mu Opioid Receptor Bound to a Morphinan Antagonist (11,597 bytes)
3: ...ors and Their Ligands." Current Topics in Medicinal Chemistry 4.1 (2004): 1-17.</ref>
4: ...nd Cl- ion (PDB entry [[4dkl]])' scene=4dkl/Overall_structure/1''>
7: ...se strands allow the single chain structures to polymerize. <scene name='Mu_Opioid_Receptor_Bound_to_...
9: ...ene> that is usually present and may help to stabilize the receptor in its inactivated form.
12: == Ligand Binding Pocket and Specificity == - User:Jennifer Ashtamker (220 bytes)
1: * Full Real Name: Jennifer Ashtamker
7: * City, State/Province, Country: Rehovot, Israel
9: * Field of Expertise or Study:Chemistry - Category:Jennifer, J.M (44 bytes)
1: List of pages with the keyword Jennifer, J.M - User:Jennifer Ye (212 bytes)
1: * Full Real Name: Jennifer Ye
7: * City, State/Province, Country: Flushing, New York, USA
9: * Field of Expertise or Study: Health Science - User:Jeremy Zucker (8,647 bytes)
1: ...n, integration, modeling, and simulation of metabolic pathways since 2002.
2: ...tabolic pathways in the web ontology language (OWL).
4: ...lementary material in Nature Molecular Systems Biology paper\cite{Feist2008Genome}.
6: ...monia, Clostridium phytofermentans, and M. tuberculosis.
8: ...ain the feasible space of possible steady-state solutions. - User:Tsung-Yi Lin/Sandbox (6,119 bytes)
3: ...ase''' is a viral aspartic protease that responsible for maturation of [http://en.wikipedia.org/wiki/...
5: ...nv protein], [http://en.wikipedia.org/wiki/Gp160 glycoprotein (GP) 160], into [http://en.wikipedia.or...
6: ...es from the surface of HIV and binds to CD4+ T cells and [http://en.wikipedia.org/wiki/Gp160#gp41 gp4...
7: ... [http://en.wikipedia.org/wiki/Virion virion] by cleaving proteins into their mature form.
9: ...s ability to replicate and infect additional cells. - User:Jennifer Wang (232 bytes)
1: * Full Real Name:Jennifer Wang
9: * Field of Expertise or Study:Biochemistry - User:Lori Wetmore (553 bytes)
1: ... focuses on cell death mechanisms in mammalian cells.
2: *[[User:Lori Wetmore/Sandbox 1|tutorial practice page]]
3: *[[User:Lori Wetmore/Sandbox 4|Joe's page]]
4: *[[User:Lori Wetmore/Sandbox 3|Jenna's page]]
5: *[[User:Lori Wetmore/Sandbox 5|Jennifer's page]] - User:Jennifer VanAusdall (200 bytes)
1: ... at William Jewell College, studying Molecular Biology within the Oxbridge Honors Program. Studied on...
3: [[User:Jennifer VanAusdall/Sandbox 1|Sculpture Yard]] - Cholera toxin (5,937 bytes)
1: ...amer of B subunits (rust, cyan, gold, yellow, purple). [[1xtc]]'>
3: ... is the main cause of the diarrhea symptoms of cholera infection.
6: ...and C belong to subunit A. Chains D,E,F,G and H belong to subunit B]]
7: {{Clear}}
8: ....</ref>,<ref>Jennifer McDowall, Cholera Toxin, EMBL-EMI, Interpro</ref>. - Sandbox207 (10,993 bytes)
12: ...e first described, exclusively synthetized by the liver.
13: ...ttp://www.rndsystems.com/cb_detail_objectname_SU05_CReactiveProtein.aspx <1>]
15: ...flammatory reaction and tissue damage. [http://biology.kenyon.edu/BMB/Chime2/2005/Jenny/FRAMES/ <2>]
20: ...//news.sciencemag.org/sciencenow/2009/06/30-02.html <6>]]]
22: ===Gene structure, family=== - UMass Chem 423 Student Projects 2011-1 (31,288 bytes)
4: Student projects continued below.
6: Brittany Forkus, Katie Geldart, Elizabeth Schutsky, Breanna Zerfas - [[#Beta-1 Adren...
8: ...[[#Acetylcholinesterase bound by Tacrine|Acetylcholinesterase]]
10: ...any Brucker, Alan Stebbins - [[#Cyclooxygenase|cyclooxygenase]]
17: ...ts activity depends on the binding of a guanyl nucleotide. - Journal:JBSD:27 (6,502 bytes)
1: ...tion load='' size='450' side='right' scene='Journal:JBSD:27/Cv/1' caption=''>
2: ...ain are determinant in maintaining TWIST1-DNA complexes ===
3: ...Anne Chemelle, Alain Puisieux, Stéphane Ansieau, Lea Payen</big> <ref>doi 10.1080/07391102.2012.7627...
5: <b>Molecular Tour</b><br>
6: ...re established and also subjected to dynamics simulations. - Cas9 (9,394 bytes)
1: ...ks in the invading DNA during an adaptive bacterial immune response.
3: See also [[Cas9 (hebrew)]].
5: ...site either is disrupted or incorporates additional genetic sequences.
7: [[Image:Layout for schematic and structure with structure.p...
11: ...een>https://www.youtube.com/embed/TdBAHexVYzc</html5media></center> - User:Jennifer Boyd (218 bytes)
1: * Full Real Name: Jennifer Boyd
5: * Institution (NO ABBREVIATIONS): Westfield State University
7: * City, State/Province, Country: Westfield, Massachusetts, USA
9: * Field of Expertise or Study: English - Μ Opioid Receptors (6,783 bytes)
1: ...(green) (PDB code [[4dkl]])' scene='Insert optional scene name here' />
5: ...n and characterization of six new alternatively spliced variants of the human μ opioid receptor gene...
6: ...n and characterization of six new alternatively spliced variants of the human μ opioid receptor gene...
11: ...am L., Kobilka Brain K., Granier Sebastien. Crystal structure of the µ-opioid receptor bound to a mo...
12: ...order to gain understanding of drug and endogenously produced opioid interactions and to then go on t... - User:Jennifer Taylor (764 bytes)
1: *[[User:Jennifer Taylor/Sandbox 1]]
2: *[[User:Jennifer Taylor/Sandbox 2]]
3: *[[User:Jennifer Taylor/Sandbox 3]]
4: *[[User:Jennifer Taylor/Sandbox 4]]
5: *[[User:Jennifer Taylor/Sandbox 5]] - User:Jennifer Taylor/Sandbox 7 (5,224 bytes)
1: ==About 4Q7Q:A Hydrolase==
2: <StructureSection load='4q7q' size='340' side='both' caption='Caption...
3: ...edit this page''' to modify. Be careful with the < and > signs.
4: ...h.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
7: ... PFam, Dali, and ProMol, 4Q7Q is believed to be a lipase. - 6osj (4,550 bytes)
2: ...nally acetylated full length alpha-synuclein fibrils (Ac1-140)==
3: ...wer='molstar' caption='[[6osj]], [[Resolution|resolution]] 2.80Å' scene=''>
4: == Structural highlights ==
5: ...ttps://proteopedia.org/fgij/fg.htm?mol=6OSJ FirstGlance]. <br>
6: ..."methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.8Å</td></tr> - 6osm (4,550 bytes)
2: ...the N-terminally acetylated C-terminal Alpha-synuclein truncation Ac1-103==
3: ...wer='molstar' caption='[[6osm]], [[Resolution|resolution]] 3.40Å' scene=''>
4: == Structural highlights ==
5: ...ttps://proteopedia.org/fgij/fg.htm?mol=6OSM FirstGlance]. <br>
6: ..."methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.4Å</td></tr>
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