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Ribosome 3D structures

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Line 49: Line 49:
**[[1ibl]], [[1ibm]] - Tt30S ribosomal subunit+THX+A-site mRNA fragment+P-site mRNA fragment+tRNA anticodon+16S rRNA<br />
**[[1ibl]], [[1ibm]] - Tt30S ribosomal subunit+THX+A-site mRNA fragment+P-site mRNA fragment+tRNA anticodon+16S rRNA<br />
-
 
*30S subunit+A-site tRNA+P-site tRNA+E-site tRNA
*30S subunit+A-site tRNA+P-site tRNA+E-site tRNA
Line 61: Line 60:
**[[6mpf]], [[6mpi]] - Tt30S ribosomal subunit +A-site tRNA-Arg +mRNA +16S rRNA+ antibiotic<br />
**[[6mpf]], [[6mpi]] - Tt30S ribosomal subunit +A-site tRNA-Arg +mRNA +16S rRNA+ antibiotic<br />
**[[6ypu]], [[6ytf]], [[7m4u]] – Ab30S + antibiotic - Cryo EM<br />
**[[6ypu]], [[6ytf]], [[7m4u]] – Ab30S + antibiotic - Cryo EM<br />
- 
*30S subunit + ribosome recycling factor
*30S subunit + ribosome recycling factor
Line 139: Line 137:
**[[6zu9]] – y48S + ABCE-1 - Cryo_EM<br />
**[[6zu9]] – y48S + ABCE-1 - Cryo_EM<br />
-
*50S subunit
+
*50S subunit
**[[2ftc]] – b50S subunit – bovine - Cryo_EM<br />
**[[2ftc]] – b50S subunit – bovine - Cryo_EM<br />
Line 147: Line 145:
**[[6gbz]], [[6gc0]], [[6gc4]], [[6gc6]], [[6gc7]], [[6gc8]], [[6ofx]], [[6wnt]], [[7bv8]], [[7lv0]], [[7lvk]] - Ec50S subunit - Cryo_EM<br />
**[[6gbz]], [[6gc0]], [[6gc4]], [[6gc6]], [[6gc7]], [[6gc8]], [[6ofx]], [[6wnt]], [[7bv8]], [[7lv0]], [[7lvk]] - Ec50S subunit - Cryo_EM<br />
**[[2zjq]], [[2zjr]], [[1nkw]] - Dr50S subunit – Deinococcus radiodurans<br />
**[[2zjq]], [[2zjr]], [[1nkw]] - Dr50S subunit – Deinococcus radiodurans<br />
-
**[[2qa4]], [[3cc2]], [[1s72]], [[4v9f]], [[1kqs]], 1qvg, [[1jj2]], [[1ffk]], [[3cc7]], [[3cce]], [[3ccj]], [[3ccl]], [[3ccm]], [[3ccq]], [[3ccr]], [[3ccs]], [[3ccu]], [[3ccv]], [[1yj9]] - Hm50S subunit – Haloarcula marismortui<br />
+
**[[2qa4]], [[3cc2]], [[1s72]], [[4v9f]], [[1kqs]], 1qvg, [[1jj2]], [[1ffk]], [[3cc7]], [[3cce]], [[3ccj]], [[3ccl]], [[3ccm]], [[3ccq]], [[3ccr]], [[3ccs]], [[3ccu]], [[3ccv]], [[1yj9]] - Hm50S subunit – ''Haloarcula marismortui''<br />
-
**[[3iy9]] – Lm50S subunit - Leishmania major<br />
+
**[[3iy9]] – Lm50S subunit - ''Leishmania major''<br />
**[[7am2]] – Lm50S + ATP + GTP – Cryo EM<br />
**[[7am2]] – Lm50S + ATP + GTP – Cryo EM<br />
**[[3j3v]], [[3j3w]] - Bs50S subunit – Bacillus subtilis<br />
**[[3j3v]], [[3j3w]] - Bs50S subunit – Bacillus subtilis<br />
Line 157: Line 155:
**[[6v3d]] – Ab50S - Cryo EM<br />
**[[6v3d]] – Ab50S - Cryo EM<br />
-
*50S subunit + antibiotics
+
*50S subunit + antibiotics
**[[7a0r]], [[7a18]] - Dr50S + antibiotic<br />
**[[7a0r]], [[7a18]] - Dr50S + antibiotic<br />
**[[3dll]], [[2zjp]], [[3cf5]], [[1xbp]], [[1sm1]], [[1nwx]], [[1nwy]], [[3pio]], [[3pip]] - Dr50S subunit +general stress protein Ctc+ antibiotic<br />
**[[3dll]], [[2zjp]], [[3cf5]], [[1xbp]], [[1sm1]], [[1nwx]], [[1nwy]], [[3pio]], [[3pip]] - Dr50S subunit +general stress protein Ctc+ antibiotic<br />
-
 
+
**[[4io9]], [[4ioa]], [[4ioc]] - Dr50S subunit + antibiotics<br />
-
[[4io9]], [[4ioa]], [[4ioc]] - Dr50S subunit + antibiotics<br />
+
**[[6u48]] - Ec50S subunit + antibiotics<br />
**[[6u48]] - Ec50S subunit + antibiotics<br />
**[[6pc5]], [[6wyv]], [[6xz7]], [[6xza]], [[6xzb]] - Ec50S + antibiotics – Cryo EM<br />
**[[6pc5]], [[6wyv]], [[6xz7]], [[6xza]], [[6xzb]] - Ec50S + antibiotics – Cryo EM<br />
Line 169: Line 166:
**[[6s0z]], [[6ddd]], [[6ddg]], [[6wqn]], [[6wqq]], [[6wrs]] – Sa50S subunit + antibiotics – Cryo EM<br />
**[[6s0z]], [[6ddd]], [[6ddg]], [[6wqn]], [[6wqq]], [[6wrs]] – Sa50S subunit + antibiotics – Cryo EM<br />
**[[3i55,]] [[3i56]] , [[3g4s]], [[3g4e]], [[3g71]], [[2qex]], [[3cc4]], [[3cd6]], [[1yhq]], [[1yi2]], [[1yij]], [[1yjn]], [[1yjw]], [[2otj]], [[2otl]], [[1yit]], [[1k73]], [[1kc8]], [[1k8a]], [[1k9m]], [[1kd1]], [[1m1k]], [[3cpw]], [[1yit]], [[1q7y]], [[1q81]], [[1q82]], [[1n8r]], [[1nji]], [[3cxc]] - Hm50S subunit + antibiotics<br />
**[[3i55,]] [[3i56]] , [[3g4s]], [[3g4e]], [[3g71]], [[2qex]], [[3cc4]], [[3cd6]], [[1yhq]], [[1yi2]], [[1yij]], [[1yjn]], [[1yjw]], [[2otj]], [[2otl]], [[1yit]], [[1k73]], [[1kc8]], [[1k8a]], [[1k9m]], [[1kd1]], [[1m1k]], [[3cpw]], [[1yit]], [[1q7y]], [[1q81]], [[1q82]], [[1n8r]], [[1nji]], [[3cxc]] - Hm50S subunit + antibiotics<br />
-
**[[5v7q]] – Mt50S subunit + antibiotic – Mycobacterium tuberculosis – Cryo EM<br />
+
**[[5v7q]] – Mt50S subunit + antibiotic – ''Mycobacterium tuberculosis'' – Cryo EM<br />
**[[6yhs]], [[6ysi]], [[7m4v]] – Ab50S + antibiotic - Cryo EM<br />
**[[6yhs]], [[6ysi]], [[7m4v]] – Ab50S + antibiotic - Cryo EM<br />
-
*50S subunit + ribosome releasing factor (RRF)
+
*50S subunit + ribosome releasing factor (RRF)
**[[2rdo]] - Ec50S subunit +EF-G+RRF – Cryo-EM<br />
**[[2rdo]] - Ec50S subunit +EF-G+RRF – Cryo-EM<br />
**[[3j0d]] - Tt50S subunit+RRF – Cryo-EM<br />
**[[3j0d]] - Tt50S subunit+RRF – Cryo-EM<br />
-
*50S subunit + various proteins
+
*50S subunit + various proteins
**[[2j28]] - Ec50S subunit +signal recognition particle – Cryo-EM<br />
**[[2j28]] - Ec50S subunit +signal recognition particle – Cryo-EM<br />
Line 225: Line 222:
**[[5anc]], [[5anb]], [[5an9]] – sm60S subunit + P0 + SbdS + EF-Tu – slime mold - Cryo EM<br />
**[[5anc]], [[5anb]], [[5an9]] – sm60S subunit + P0 + SbdS + EF-Tu – slime mold - Cryo EM<br />
**[[6qkl]] – sm60S subunit + P0 + SbdS + EIF-6 - Cryo EM<br />
**[[6qkl]] – sm60S subunit + P0 + SbdS + EIF-6 - Cryo EM<br />
-
**[[3j39]] – Dm60S subunit + P0 – Drosophila melanogaster - Cryo EM<br />
+
**[[3j39]] – Dm60S subunit + P0 – ''Drosophila melanogaster'' - Cryo EM<br />
**[[4v8p]] - Tet60S subunit+ 26S rRNA+ translation initiation factor 6 <br />
**[[4v8p]] - Tet60S subunit+ 26S rRNA+ translation initiation factor 6 <br />
Line 246: Line 243:
**[[4v5n]] – TtRibosome post-translocational – Cryo-EM<br />
**[[4v5n]] – TtRibosome post-translocational – Cryo-EM<br />
**[[5v8i]] – TtRibosome – rps17 <br />
**[[5v8i]] – TtRibosome – rps17 <br />
-
**[[4v8m]] - TbRibosome – Trypanosoma brucei - Cryo-EM<br />
+
**[[4v8m]] - TbRibosome – ''Trypanosoma brucei'' - Cryo-EM<br />
-
**[[4v6u]] – Ribosome – Pyrococcus furiosus - Cryo-EM<br />
+
**[[4v6u]] – Ribosome – ''Pyrococcus furiosus'' - Cryo-EM<br />
**[[5zep]], [[5zeb]], [[5o61]] – MsRibosome - Cryo-EM<br />
**[[5zep]], [[5zeb]], [[5o61]] – MsRibosome - Cryo-EM<br />
**[[5tcu]], [[6s13]], [[5t7v]], [[6yef]], [[7asp]], [[7nhl]], [[7nhm]] – SaRibosome - Cryo-EM<br />
**[[5tcu]], [[6s13]], [[5t7v]], [[6yef]], [[7asp]], [[7nhl]], [[7nhm]] – SaRibosome - Cryo-EM<br />
-
**[[6rm3]] - Ribosome – Valrimorpha necatrix - Cryo-EM<br />
+
**[[6rm3]] - Ribosome – ''Valrimorpha necatrix'' - Cryo-EM<br />
**[[6w6p]] - EfRibosome - Cryo-EM<br />
**[[6w6p]] - EfRibosome - Cryo-EM<br />
**[[7o5b]] - BsRibosome - Cryo-EM<br />
**[[7o5b]] - BsRibosome - Cryo-EM<br />
-
**[[7qep]] - Ribosome – Encephalitozoon cuniculi - Cryo-EM<br />
+
**[[7qep]] - Ribosome – ''Encephalitozoon cuniculi'' - Cryo-EM<br />
**[[6v3b]] – AbRibosome - Cryo EM<br />
**[[6v3b]] – AbRibosome - Cryo EM<br />
-
**[[7jil]] – Ribosome – Flavobacterium johnsoniae - Cryo EM<br />
+
**[[7jil]] – Ribosome – ''Flavobacterium johnsoniae'' - Cryo EM<br />
*70S ribosome complex with mRNA
*70S ribosome complex with mRNA
Line 283: Line 280:
**[[6boh]] – TtRibosome + RF-1 + antibiotic<br />
**[[6boh]] – TtRibosome + RF-1 + antibiotic<br />
**[[6xhh]] – TtRibosome + protein Y + antibiotic<br />
**[[6xhh]] – TtRibosome + protein Y + antibiotic<br />
-
**[[4v7l]], [[4v7m]] – Ribosome + antibiotic – Streptomyces puniceus<br />
+
**[[4v7l]], [[4v7m]] – Ribosome + antibiotic – ''Streptomyces puniceus''<br />
**[[5v93]] – MtRibosome + antibiotic – Cryo EM<br />
**[[5v93]] – MtRibosome + antibiotic – Cryo EM<br />
**[[6ha1]] – BsRibosome + antibiotic – Cryo EM<br />
**[[6ha1]] – BsRibosome + antibiotic – Cryo EM<br />
Line 338: Line 335:
**[[6dzi]] – MsRibosome + MPY – Cryo-EM<br />
**[[6dzi]] – MsRibosome + MPY – Cryo-EM<br />
**[[7msc]], [[7msh]], [[7msm]], [[7msz]] – MtRibosome + Etta – Cryo-EM<br />
**[[7msc]], [[7msh]], [[7msm]], [[7msz]] – MtRibosome + Etta – Cryo-EM<br />
-
**[[7nhn]] – Ribosome + ABCF – Listeria monocytogenes – Cryo-EM<br />
+
**[[7nhn]] – Ribosome + ABCF – ''Listeria monocytogenes'' – Cryo-EM<br />
**[[6v39]], [[6v3a]] – AbRibosome + tRNA – Cryo EM<br />
**[[6v39]], [[6v3a]] – AbRibosome + tRNA – Cryo EM<br />
**[[7p7u]] - EfRibosome + P-tRNA - Cryo-EM<br />
**[[7p7u]] - EfRibosome + P-tRNA - Cryo-EM<br />

Revision as of 11:12, 24 February 2022

Updated on 24-February-2022 For a general description of the protein see Ribosome

{{#tree:id=OrganizedByTopic|openlevels=0|

  • 30S subunit + RNA
  • 30S subunit +tRNA+mRNA
    • 6vu3 – Ec30S + mRNA - Cryo EM
    • 3t1h, 3t1y - Tt30S ribosomal subunit+16S rRNA+tRNA Lys +mRNA
    • 6dti, 6mkn - Tt30S ribosomal subunit+16S rRNA+tRNA Arg +mRNA
    • 3v6u, 3v6v - Tt30S ribosomal subunit+16S rRNA+tRNA Phe+tRNA fMet+mRNA
    • 1xnq, 1xnr - Tt30S ribosomal subunit+THX+mRNA+tRNA anticodon+16S rRNA
    • 4gkj, 4gkk - Tt30S ribosomal subunit +16S rRNA +THX + mRNA + tRNA Met
    • 4jv5, 4jya, 4k0k - Tt30S ribosomal subunit +16S rRNA +THX + mRNA + ASL-tRNA
  • 30S subunit +A-site tRNA
    • 2uxd, 2uxc - Tt30S ribosomal subunit+THX+A-site mRNA CGGG+tRNA anticodon+16S rRNA
    • 1n32, 1n33 - Tt30S ribosomal subunit+THX+A-site mRNA fragment+tRNA anticodon+16S rRNA
    • 1n34 - Tt30S ribosomal subunit+THX+A-site mRNA fragment +16S rRNA
    • 1xmo, 1xmq]] - Tt30S ribosomal subunit+THX+A-site mRNA+tRNA anticodon+16S rRNA
    • 2uxb - Tt30S ribosomal subunit+THX+A-site mRNA GGGU+tRNA anticodon+16S rRNA
  • 30S subunit+P-site tRNA
    • 1ibk - Tt30S ribosomal subunit+THX+P-site mRNA fragment +16S rRNA
    • 2om7 – TtRPS2+TtRPS12+TtRPL1+ P-site tRNA+16S rRNA fragment+23S RRNA fragment
    • 5u4j – EcRPS3+EcRPS4+EcRPS5 + EcRPS12 + P-site tRNA+16S rRNA +23S rRNA + mRNA + RF-2 – Cryo EM
    • 5zeu - Ms30S ribosomal subunit + P-site tRNA f`Met +16S rRNA - Cryo EM
  • 30S subunit+A-site tRNA+P-site tRNA
    • 1ibl, 1ibm - Tt30S ribosomal subunit+THX+A-site mRNA fragment+P-site mRNA fragment+tRNA anticodon+16S rRNA
  • 30S subunit+A-site tRNA+P-site tRNA+E-site tRNA
    • 1jgo, 1jgp, 1jgq - Tt30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+tRNA Phe+mRNA +16S rRNA
  • 30S subunit + antibiotics
  • 30S subunit + ribosome recycling factor
    • 3r8n, 3r8o - Ec30S ribosomal subunit+16S rRNA+ribosome recycling factor + mRNA + tRNA
  • 30S subunit + elongation factor
    • 4btc - Tt30S ribosomal subunit+THX+RNA +16S rRNA+elongation factor G
    • 6enu - Ec30S ribosomal subunit+THX+RNA +16S rRNA+elongation factor P – Cryo EM
  • 30S subunit + translation initiation factor
    • 1hr0 - Tt30S ribosomal subunit+THX+IF+16S rRNA
    • 1i96 - Tt30S ribosomal subunit+THX+IF3+16S rRNA
    • 6o7k - Ec30S ribosomal subunit+THX+IF1 + IF2 +16S rRNA - tRNA + mRNA – Cryo EM
  • 30S subunit + various proteins
    • 1x18 – TtRPS2+TtRPS7+TtRPS11+TtRPS18+GTP-binding protein ERA+RNA fragments
    • 6ny6 - Tt30S ribosomal subunit + toxin YoeB
    • 2ykr - EcRPS2 + 16S rRNA + GMPPNP + GTPase RSGA
    • 4a2i - EcRPS2 + 16S rRNA + GTPase RSGA – Cryo EM
    • 4adv - EcRPS2 + 16S rRNA + methyltransferase – Cryo EM
    • 5uz4, 5no3, 5no2 - Ec30S ribosomal subunit+ BS6 + US7 + GTPase RsgA +16S rRNA – Cryo EM
    • 6awb, 6awc, 6awd - Ec30S ribosomal subunit + RNA polymerase - Cryo EM
    • 7o5h - Ec30S + KsgA - Cryo EM
    • 6dzk - Ms30S ribosomal subunit + HPF +16S rRNA - Cryo EM
    • 6tmf - 30S ribosomal subunit + RNA-binding protein + L7AE + L41E + ATPase +16S rRNA – Thermococcus celer - Cryo EM
  • 40S ribosomal subunit
  • 40S ribosomal subunit complex
    • 6nf8, 6neq - h40S ribosomal subunit + translation initiation factor 3 - Cryo-EM
    • 5oa3 - h40S ribosomal subunit + translation initiation factor 2D - Cryo-EM
    • 6g4w - h40S ribosomal subunit + PNO1 + bystin + TSR1 + tRNA methyltransferase - Cryo-EM
    • 6g5h - h40S ribosomal subunit + RACK1 - Cryo-EM
    • 6zlw, 6zmt, 6zn5, 6zoj, 6zok, 6zol, 7k5i - h40S + SARS Nsp1 - Cryo-EM
    • 5vyc - h40S ribosomal subunit + DENR-MCT-1 - Cryo-EM
    • 4kzx - r40S ribosomal subunit+ RACK1 + EIF1 – rabbit – Cryo-EM
    • 4kzy - r40S ribosomal subunit+ RACK1 + EIF1 + EIF1A – Cryo-EM
    • 4kzz - r40S ribosomal subunit+ RACK1 + EIF1A + initiator tRNA – Cryo-EM
    • 6p4g, 6p4h, 6w2s, 6w2t - r40S ribosomal subunit + virus IRES – Cryo-EM
    • 7jqb - r40S + SARS Nsp1 - Cryo-EM
    • 7jqc - r40S + SARS Nsp1 + virus IRES - Cryo-EM
    • 4bts - r40S ribosomal subunit+ 18SrRNA + EIF1 + EIF1A
    • 6fai, 6y7c - y40S ribosomal subunit + PNO1 + 20S rRNA + TSR1 + LTV1 + RIO2 - Cryo-EM
    • 6wdr - y40S ribosomal subunit + RACK1 + 20S rRNA + TSR1 - Cryo-EM
    • 6eml - y40S ribosomal subunit + PNO1 + 20S rRNA + TSR1 + LTV1 + RIO2 + essential nuclear protein 1 – Cryo-EM
    • 6rbe, 6rbd - y40S ribosomal subunit + TSR1 – Cryo-EM
    • 6zvi - y40S + Mbf1 – Cryo-EM
    • 6nd4 - y40S ribosomal subunit + SOF1 + IMP3 + MPP10 + BUD21 + NOP56 + NOP58 + NOP1 + SNU13 + RRP9 + FAF1 – Cryo-EM
    • 4v5o - Tet40S ribosomal subunit+RACK1 – Tetrahymena thermophila
    • 5xyi - Tv40S ribosomal subunit+ RACK1 – Trichomonas vaginalis - Cryo-EM
    • 5opt – Tc40S ribosomal subunit + KSRP – Trypanosoma cruzi - Cryo-EM
    • 6okk – Pf40S ribosomal subunit + antibiotics – Plasmodium falciparum - Cryo-EM
  • 43S preinitiation
    • 6zvj, 7a09 – h43S + ABCE-1 - Cryo_EM
    • 6zon, 6zp4 – h43S + SARS Nsp1 - Cryo_EM
    • 6zce, 7a1g – y43S + ABCE-1 - Cryo_EM
    • 7ase – Tc43S + helicase - Cryo_EM
  • 48S preinitiation
  • 50S subunit
  • 50S subunit + antibiotics
  • 50S subunit + ribosome releasing factor (RRF)
    • 2rdo - Ec50S subunit +EF-G+RRF – Cryo-EM
    • 3j0d - Tt50S subunit+RRF – Cryo-EM
  • 50S subunit + various proteins
    • 2j28 - Ec50S subunit +signal recognition particle – Cryo-EM
    • 6i0y - Ec50S subunit + tRNA – Cryo-EM
    • 6s0k - Ec50S subunit + tRNA + SecA + RodZ – Cryo-EM
    • 5o2r - Ec50S subunit + antimicrobial peptide – Cryo-EM
    • 5ot7 - Ec50S subunit + EF-G – Cryo-EM
    • 6ys3 - Ec50S + peptide – Cryo-EM
    • 7bl2, 7bl3 - Ec50S + ObgE – Cryo-EM
    • 7bl6 - Ec50S+ ObgE + GMPPNP – Cryo-EM
    • 7bl4 - Ec50S + ObgE + GMPPNP + RsfS – Cryo-EM
    • 1w2b - Hm50S subunit +trigger factor N-terminal
    • 1qvf- Hm50S subunit + deacylated tRNA minihelix
    • [1q86]] - Hm50S subunit +CCA-Phe-caproic acid-biotin
    • 3cma, 3cme, 1vq8, 1vq9, 1m90 - Hm50S subunit +CCA+CCA-Phe-CAP-BIO
    • 1vq4, 1vq5, 1vq7, 1vql, 1vqm, 1vqp – Hm50S subunit +transition state analog
    • 1vq6, 1vqk, 1vqn – Hm50S subunit + c-hpmn+CCA-Phe-caproic acid-biotin
    • 1vqo – Hm50S subunt + CCPMN
    • 6ppk - Bs50S subunit + ribosome biogenesis GTPase A – Cryo EM
    • 6ha8 - Bs50S subunit + VmlR – Cryo EM
    • 6htq - Bs50S subunit + RelA – Cryo EM
    • 6szs - Bs50S subunit + BrfA – Cryo EM
    • 7aqc, 7aqd, 7as8, 7as9, 7ope - Bs50S + tRNA + Rqc – Cryo EM
    • 7kgb - Mt50S + SEQ-9 – Cryo EM
  • 60S subunit
  • 60S subunit + various proteins
    • 3j3b – h60S subunit + P0 + P1 + P2 - Cryo EM
    • 3izs – y60S subunit + P0 + P1 + P2 - Cryo EM
    • 4v8t – y60S subunit + P0 + P1 + P2 + ARX1 - Cryo EM
    • 3o5h – y60S subunit + 5S rRNA + 5.8S rRNA + 25S rRNA + P0
    • 6em5, 6em4, 6em3, 6elz, 6em1 – y60S ribosomal subunit + BRX1 + 5.8S rRNA + 25S RNA + CIC1 + ERB1 + HAS1 + MRT4 + NIP7 + ribosome biogenesis proteins + EIF-6 + nucleolar proteins – Cryo-EM
    • 6cb1, 6c0f, 5z3g – y60S ribosomal subunit + 5.8S rRNA + 25S RNA + CIC1 + HAS1 + MRT4 + NIP7 + ribosome biogenesis proteins + RNA-processing protein + nucleolar proteins + pescadillo homolog – Cryo-EM
    • 6r87, 6r84 – y60S subunit + Vms1 – Cryo EM
    • 5t6r, 5t62 – y60S subunit + Nmd3 – Cryo EM
    • 6ft6 – y60S ribosomal subunit + NOP53 – Cryo-EM
    • 6ylg, 6ylh, 6ylx, 6yly, 7bl5, 7bt6, 7btb – ypre-60S – Cryo-EM
    • 5anc, 5anb, 5an9 – sm60S subunit + P0 + SbdS + EF-Tu – slime mold - Cryo EM
    • 6qkl – sm60S subunit + P0 + SbdS + EIF-6 - Cryo EM
    • 3j39 – Dm60S subunit + P0 – Drosophila melanogaster - Cryo EM
    • 4v8p - Tet60S subunit+ 26S rRNA+ translation initiation factor 6
  • 70S ribosome
  • 70S ribosome complex with mRNA
  • 70S ribosome complex with antibiotic
  • 70S ribosome complex with release factor
    • 6eri – sRibosome + RRF + hibernation promoting factor - Cryo-EM
    • 4v5a – TtRibosome + RRF
    • 4v63, 4v7p, 6bok – TtRibosome + RF-1
    • 4v5e, 4v4r, 4v67, 4v9n – TtRibosome + RF-2
    • 4v5j – TtRibosome + RF-2 + substrate analog
    • 4v8o – TtRibosome + RF-3
    • 4v54 – EcRibosome + RRF
    • 6dnc, 6osk, 6osq – EcRibosome + RF-1 – Cryo-EM
    • 6ouo, 6og7, 6ogf, 6ogg, 6ogi, 6ot3, 6ost, 7oj0 – EcRibosome + RF-2 – Cryo-EM
    • 7o1c – EcRibosome + RF-2 + Tnac peptide – Cryo-EM
    • 5u4i, 5u9f, 5u9g – EcRibosome + RF-2 + ArfA – Cryo-EM
    • 4v89 – EcRibosome + RF-3
    • 6gxp – EcRibosome + RF-3 – Cryo EM
    • 4v85 – EcRibosome + RF-3 + mRNA + antibiotic
    • 6gwt, 6gxm, 6gxn, 6gxo – EcRibosome + RF-1+ RF-3 + P-site tRNA – Cryo-EM
  • 70S ribosome complex with various proteins
    • 4v5b – EcRibosome + PDF-binding helix
    • 4v5h – EcRibosome + Tnac leader peptide
    • 7pjs, 7pjt – EcRibosome + tRNA – Cryo EM
    • 7o1a, 7o19, 7oiz, 7p3k – EcRibosome + Tnac leader peptide – Cryo EM
    • 4v6v - EcRibosome+ tetracycline resistance protein + mRNA + P-tRNA – Cryo-EM
    • 6vwl, 6vwm, 6vwn – EcRibosome + HIV FSS – Cryo-EM
    • 7d6z – EcRibosome + peptide deformylase + trigger factor – Cryo-EM
    • 7d80 – EcRibosome + peptide deformylase + trigger factor + Met aminopeptidase – Cryo-EM
    • 4v6m – EcRibosome + SecYE – Cryo-EM
    • 4v4g – EcRibosome + protein Y – Cryo-EM
    • 7nww – EcRibosome + CspA – Cryo-EM
    • 7nwt – EcRibosome + virus protein – Cryo-EM
    • 6xe0, 6ztl – EcRibosome + NusG – Cryo-EM
    • 4v7i – EcRibosome +preprotein translocase – Cryo-EM
    • 4v49 - EcRibosome +general stress protein Ctc – Cryo-EM
    • 4v8g, 4v8h – TtRibosome + modulation factor
    • 4v8i - TtRibosome + ribosome-associated inhibitor
    • 4v95 – TtRibosome + YAEJ
    • 4v5k – TtRibosome + colicin E3
    • 4v7j, 4v7k – TtRibosome + toxin RelE
    • 6otr, 6oxa, 6oxi - TtRibosome + toxin YoeB
    • 6cfk – TtRibosome + His-CAM + YfiA
    • 6cfl – TtRibosome + Lys-CAM + YfiA
    • 6fkr – TtRibosome + Tur1A
    • 7jql, 7jqm – TtRibosome + mRNA + tRNA + antimicrobial peptide
    • 5zlu – TtRibosome + ABC-F – Cryo-EM
    • 6dzi – MsRibosome + MPY – Cryo-EM
    • 7msc, 7msh, 7msm, 7msz – MtRibosome + Etta – Cryo-EM
    • 7nhn – Ribosome + ABCF – Listeria monocytogenes – Cryo-EM
    • 6v39, 6v3a – AbRibosome + tRNA – Cryo EM
    • 7p7u - EfRibosome + P-tRNA - Cryo-EM
    • 7nhk – EfRibosome + LsaA – Cryo EM
    • 7p7q, 7p7s, 7p7t – EfRibosome + ABCF – Cryo-EM
  • 70S ribosome complex with tRNA mRNA
    • 6gsj, 6gsk, 6gsl – TtRibosome + A-site tRNA-Thr + mRNA + tRNA-fMet
    • 6n1d – TtRibosome + mRNA + tRNA
    • 6bz7, 6bz8 – TtRibosome + A-site tRNA-Leu
    • 5vpo, 5vpp, 6ndk – TtRibosome + tRNA-SufA6
    • 6n9e, 6n9f – TtRibosome + mRNA + P-site tRNA
    • 6uo1 – TtRibosome + mRNA + A-site tRNA + P-site tRNA + E-site tRNA
    • 6q95, 6q97 – TtRibosome + A-site tRNA – Cryo-EM
    • 6q98 – TtRibosome + P-site tRNA – Cryo-EM
    • 6q9a – TtRibosome + E-site tRNA – Cryo-EM
    • 5uq7 – TtRibosome + A-site tRNA + dnaX – Cryo-EM
    • 5uq8 – TtRibosome + E-site tRNA + dnaX – Cryo-EM
    • 6cfj – TtRibosome + His-CAM + A-site tRNA + P-site tRA + E-site tRNA + mRNA + antibiotic
    • 7mt2, 7mt3, 7mt7 – MtRibosome + P-tRNA + E-tRNA – Cryo-EM
    • 7pju – EcRibosome + A-tRNA + P-tRNA + E-tRNA – Cryo-EM
  • 70S ribosome complex with elongation factor
  • 80S ribosome
  • 80S ribosome complexes
    • 6r6p – hRibosome + XBP1u - Cryo-EM
    • 6zvh – hRibosome + EDF1 - Cryo-EM
    • 6z6n – hRibosome + EBP1 - Cryo-EM
    • 6z6m – hRibosome + EBP1 +EF-2 + SERBP1 - Cryo-EM
    • 6z6l – hRibosome + CCDC124 - Cryo-EM
    • 6zm7 – hRibosome + CCDC124 + EBP1 - Cryo-EM
    • 6z6e – hRibosome + CCDC124 + SARS Nsp1 - Cryo-EM
    • 6zmi – hRibosome + SARS Nsp1 - Cryo-EM
    • 6zmo – hRibosome + EF-1 + SARS Nsp1 - Cryo-EM
    • 6olg, 6oli – hRibosome + drug - Cryo-EM
    • 6olz, 6xa1 – hRibosome + tRNA + drug - Cryo-EM
    • 6ole, 6olf, 6om0, 6om7 – hRibosome + A-site tRNA + P-site tRNA + drug - Cryo-EM
    • 7nfx – hRibosome + SRP + SRP receptor - Cryo-EM
    • 6fti, 6ftj - dRibosome + oligosaccharyltransferase + Sec61 - Cryo-EM
    • 6ftg - dRibosome + OST - Cryo-EM
    • 3j0l, 3j0o, 3j0p, 3j0q - rRibosome+ mRNA – Cryo-EM
    • 6mte, 6mtd – rRibosome + EF2 + SERBP1 - Cryo-EM
    • 6d9j, 6d90 – rRibosome + RF-1 + P-site tRNA - Cryo-EM
    • 7o80 – rRibosome + RF-1 +ABCE-1 - Cryo-EM
    • 7nwg – rRibosome + A-tRNA + P-site tRNA + E-tRNA + antibiotic- Cryo-EM
    • 6frk – rRibosome + SRP + SRP receptor - Cryo-EM
    • 6hcj – rRibosome + A-site tRNA + P-site tRNA - Cryo-EM
    • 6mtb – rRibosome + P-site tRNA + Z-site tRNA - Cryo-EM
    • 6mtc – rRibosome + Z-site tRNA + IFRD2 - Cryo-EM
    • 6r5q – rRibosome + XBP1u - Cryo-EM
    • 6r6g – rRibosome + XBP1u + SRP - Cryo-EM
    • 6r7q – rRibosome + XBP1u + Sec61 - Cryo-EM
    • 6t59 – rRibosome +b-tubulin- Cryo-EM
    • 6z6j, 6z6k – rRibosome + Lso2 - Cryo-EM
    • 7nwh, 7nwi – rRibosome + antibiotic – Cryo EM
    • 6p5i, 6p5j, 6p5k, 6p5n, 6ip6, 6ip8, 6zvk, 7a01 - rRibosome + IRES – Cryo-EM
    • 4v6w - DmRibosome + EF2 + guanine nucleotide-binding protein – Cryo-EM
    • 7ls1, 7ls2 – mRibosome + EF2 - Cryo-EM
    • 7osa, 7osm – yRibosome + EF2 + GTP
    • 4v4b – yRibosome + EF2 + antifungal - Cryo-EM
    • 6gqv, 6gqb, 6gq1 – yRibosome + EF2 + mRNA + tRNA - Cryo-EM
    • 5tga, 5tgm – yRibosome + A-site tRNA-Pro
    • 5tbw, 5obm, 5on6 – yRibosome + antibiotic
    • 7azy – yRibosome + antibiotic – Cryo EM
    • 6hd7 – yRibosome + NatA – Cryo EM
    • 6s47 – yRibosome + New1 – Cryo EM
    • 6hhq – yRibosome + C45 – Cryo EM
    • 6q8y – yRibosome + Xrn1 – Cryo EM
    • 7rr5 – yRibosome + Rbg1 + Tma46 – Cryo EM
    • 6xir – yRibosome + ubiquitin – Cryo EM
    • 7of1, 7oh3, 7ohq, 7ohp, 7ohr, 7ohs, 7oht, 7ohu, 7ohv, 7ohw, 7ohx, 7ohy – yRibosome + Nog1-TAP – Cryo EM
    • 6woo – yRibosome + tRNA-Met + eIF5B + GDP – Cryo EM
    • 7b7d – yRibosome + A-tRNA + P-tRNA + EF3 – Cryo EM
    • 7nrc, 7nrd – yRibosome + Gcn1 + A-tRNA + P-tRNA + eIF5A + Rbg2 + Gir2 – Cryo EM
    • 6zu5 – Ribosome + Lso2 – Paranosema locustae - Cryo-EM
    • 4v7h - TlRibosome+P-site tRNA – Thermomyces lanuginosus
    • 5umd – PfRibosome + mefloquin - Cryo-EM
    • 5osg – LdRibosome + KSRP - Cryo-EM
    • 6uz7 – Ribosome + E-site tRNA + P-site tRNA + IF5B – Kluyveromyces lactis - Cryo-EM
  • 90S pre-ribosome
  • 100S ribosome
  • Mitoribosome or mitochondrial ribosome
  • 28S small subunit
    • 6gaz – p28S ribosomal subunit – pig - Cryo-EM
    • 3jd5 – b28S ribosomal subunit - Cryo-EM
    • 6sg9, 6sga, 6sgb – Tb28S ribosomal subunit - Cryo-EM
    • 6hiy, 6hiw – Tb28S ribosomal subunit+ IF-3 - Cryo-EM
    • 6yw5 – Nc28S - Cryo-EM
  • 39S large subunit
  • 55S small+large mitoribosome

}}

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