This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Glucanase

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 20: Line 20:
**[[2hyk]] - Endo-Gase – ''Nococardiopsis''<br />
**[[2hyk]] - Endo-Gase – ''Nococardiopsis''<br />
**[[2cyg]] - Endo-Gase – ''Musa acuminate''<br />
**[[2cyg]] - Endo-Gase – ''Musa acuminate''<br />
-
**[[4k35]], [[4k3a]] - Endo-Gase – ''Rhizomucor miehei''<br />
+
**[[4k35]], [[4k3a]] - RmEndo-Gase – ''Rhizomucor miehei''<br />
**[[4dfs]] - Endo-Gase catalytic domain – ''Thermotoga petrophila''<br />
**[[4dfs]] - Endo-Gase catalytic domain – ''Thermotoga petrophila''<br />
-
**[[2cl2]] - Endo-Gase – ''Phanerochaete chrysosporium''<br />
+
**[[2cl2]] - PcEndo-Gase – ''Phanerochaete chrysosporium''<br />
**[[3ur7]], [[3ur8]] - pEndo-Gase – potato<br />
**[[3ur7]], [[3ur8]] - pEndo-Gase – potato<br />
**[[4bow]], [[4crq]] - ZgEndo-Gase catalytic domain (mutant) – ''Zobellia galactanivorans''<br />
**[[4bow]], [[4crq]] - ZgEndo-Gase catalytic domain (mutant) – ''Zobellia galactanivorans''<br />
Line 30: Line 30:
**[[5h9x]] - PbEndo-Gase – ''Paenibacillus barengoltzii'' <br />
**[[5h9x]] - PbEndo-Gase – ''Paenibacillus barengoltzii'' <br />
**[[4wzf]] - MtEndo-Gase – ''Mycobacterium tuberculosis''<br />
**[[4wzf]] - MtEndo-Gase – ''Mycobacterium tuberculosis''<br />
 +
**[[5m5z]], [[5m60]] - Endo-Gase – ''Chaetomium thermophilum''<br />
 +
**[[5h4e]] - Endo-Gase – ''Clodytidium beijerinckii''<br />
*''Endo-1,3– β-glucanase binary complex''
*''Endo-1,3– β-glucanase binary complex''
Line 36: Line 38:
**[[4bpz]], [[4cte]] - ZgEndo-Gase catalytic domain (mutant) + trisasccharide<br />
**[[4bpz]], [[4cte]] - ZgEndo-Gase catalytic domain (mutant) + trisasccharide<br />
**[[5h9y]] - PbEndo-Gase + laminarihexaose <br />
**[[5h9y]] - PbEndo-Gase + laminarihexaose <br />
 +
**[[5xbz]], [[5xc2]] - RmEndo-Gase + laminaripentaose <br />
*Endo-1,4-β-glucanase
*Endo-1,4-β-glucanase
Line 52: Line 55:
**[[2v3g]], [[2cip]], [[2bv9]], [[4im4]] - CtEndo-Gase H catalytic domain<br />
**[[2v3g]], [[2cip]], [[2bv9]], [[4im4]] - CtEndo-Gase H catalytic domain<br />
**[[2lro]], [[2lrp]] - CtEndo-Gase H CBM11 domain – NMR<br />
**[[2lro]], [[2lrp]] - CtEndo-Gase H CBM11 domain – NMR<br />
-
**[[2eqd]] - CtEndo-Gase (mutant) <br />
+
**[[2eqd]] - CtEndo-Gase 44A (mutant) <br />
-
**[[2eo7]] - CtEndo-Gase<br />
+
**[[2eo7]] - CtEndo-Gase 44A<br />
 +
**[[5gxx]], [[5gxz]], [[5gy0]], [[5gy1]] - CtEndo-Gase Q (mutant)<br />
**[[3qxf]] - EcEndo-Gase – ''Escherichia coli<''br />
**[[3qxf]] - EcEndo-Gase – ''Escherichia coli<''br />
**[[3amh]], [[1vho]] - TmEndo-Gase –'' Thermotoga maritima''<br />
**[[3amh]], [[1vho]] - TmEndo-Gase –'' Thermotoga maritima''<br />
Line 84: Line 88:
**[[1h1n]] - Endo-Gase – ''Thermoascus aurantiacus''<br />
**[[1h1n]] - Endo-Gase – ''Thermoascus aurantiacus''<br />
**[[3rjx]] - FnEndo-Gase – ''Fervidobacterium nodosum''<br />
**[[3rjx]] - FnEndo-Gase – ''Fervidobacterium nodosum''<br />
-
**[[3vl8]], [[3vl9]] - AaEndo-Gase – ''Aspergillus aculeatus''<br />
+
**[[3vl8]], [[3vl9]], [[5gm3]] - AaEndo-Gase – ''Aspergillus aculeatus''<br />
**[[4dod]] - CbEndo-Gase GH9 module – ''Caldicellulosiruptor bescii''<br />
**[[4dod]] - CbEndo-Gase GH9 module – ''Caldicellulosiruptor bescii''<br />
**[[4doe]] - CbEndo-Gase GH9 module + ligand<br />
**[[4doe]] - CbEndo-Gase GH9 module + ligand<br />
Line 100: Line 104:
**[[5czl]] - Endo-Gase – ''Raoultella ornithinolytica'' <br />
**[[5czl]] - Endo-Gase – ''Raoultella ornithinolytica'' <br />
**[[5cd2]] - Endo-Gase – ''Vibrio fischeri'' <br />
**[[5cd2]] - Endo-Gase – ''Vibrio fischeri'' <br />
 +
**[[5xbu]] - AcEndo-Gase – ''Ampullaria crossean''<br />
*''Endo-1,4–β-glucanase binary complex''
*''Endo-1,4–β-glucanase binary complex''
Line 113: Line 118:
**[[2bvd]] - CtEndo-Gase H catalytic domain + polysaccharide<br />
**[[2bvd]] - CtEndo-Gase H catalytic domain + polysaccharide<br />
**[[1cen]], [[4u5i]], [[4u5k]] - CtEndo-Gase catalytic domain (mutant) + polysaccharide<br />
**[[1cen]], [[4u5i]], [[4u5k]] - CtEndo-Gase catalytic domain (mutant) + polysaccharide<br />
 +
**[[5gxy]] - CtEndo-Gase Q (mutant) + cellobiose<br />
**[[3qxq]], [[2jen]] - EcEndo-Gase (mutant) + polysaccharide<br />
**[[3qxq]], [[2jen]] - EcEndo-Gase (mutant) + polysaccharide<br />
**[[3amm]] - TmEndo-Gase + polysaccharide<br />
**[[3amm]] - TmEndo-Gase + polysaccharide<br />
Line 130: Line 136:
**[[3rjy]] – FnEndo-Gase + glucose<br />
**[[3rjy]] – FnEndo-Gase + glucose<br />
**[[3vlb]] - AaEndo-Gase + protein EDGP<br />
**[[3vlb]] - AaEndo-Gase + protein EDGP<br />
 +
**[[5gm5]] - AaEndo-Gase (mutant) + cellobiose <br />
 +
**[[5gm4]] - AaEndo-Gase (mutant) + cellotetraose <br />
**[[3wdu]], [[3wdv]] - PtEndo-Gase + polysaccharide<br />
**[[3wdu]], [[3wdv]] - PtEndo-Gase + polysaccharide<br />
**[[3wdx]], [[3wdy]] - PtEndo-Gase (mutant) + polysaccharide<br />
**[[3wdx]], [[3wdy]] - PtEndo-Gase (mutant) + polysaccharide<br />
**[[5i79]] - AnEndo-Gase (mutant) + polysaccharide<br />
**[[5i79]] - AnEndo-Gase (mutant) + polysaccharide<br />
 +
**[[5xc4]], [[5xc8]], [[5xc9]], [[5xbx]] - AcEndo-Gase + cellobiose <br />
*Endo-1,3-1,4-β-glucanase
*Endo-1,3-1,4-β-glucanase
Line 138: Line 147:
**[[3o5s]] - BsEndo-Gase catalytic domain<br />
**[[3o5s]] - BsEndo-Gase catalytic domain<br />
**[[3i4i]] - Endo-Gase residues 26-242 – ''Bacterium''<br />
**[[3i4i]] - Endo-Gase residues 26-242 – ''Bacterium''<br />
-
**[[3d6e]] - BlEndo-Gase (mutant) – ''Bacillus licheniformis''<br />
+
**[[1gbg]], [[4yzt]], [[4yzp]] - BlEndo-Gase – ''Bacillus licheniformis''<br />
 +
**[[3d6e]] - BlEndo-Gase (mutant) <br />
**[[3h0o]], [[3hr9]], [[2r49]], [[3axd]] - FsEndo-Gase (mutant) – ''Fibrobacter succinogenes''<br />
**[[3h0o]], [[3hr9]], [[2r49]], [[3axd]] - FsEndo-Gase (mutant) – ''Fibrobacter succinogenes''<br />
**[[1zm1]], [[1mve]] - FsEndo-Gase<br />
**[[1zm1]], [[1mve]] - FsEndo-Gase<br />
**[[1aq0]] - bEndo-Gase – barley<br />
**[[1aq0]] - bEndo-Gase – barley<br />
-
**[[1gbg]] - BlEndo-Gase – <br />
 
**[[1glh]] - Endo-Gase – synthetic<br />
**[[1glh]] - Endo-Gase – synthetic<br />
**[[1ghr]], [[1ghs]] - Endo-Gase – ''Hordeum vulgare''<br />
**[[1ghr]], [[1ghs]] - Endo-Gase – ''Hordeum vulgare''<br />
Line 149: Line 158:
**[[3wdw]] – PtEndo-Gase (mutant)<br />
**[[3wdw]] – PtEndo-Gase (mutant)<br />
**[[4x0v]] - CbEndo-Gase GH5 module <br />
**[[4x0v]] - CbEndo-Gase GH5 module <br />
 +
**[[5h4r]] - CbEndo-Gase GH5 module (mutant) + cellotetraose<br />
*''Endo-1,3-1,4–β-glucanase binary complex''
*''Endo-1,3-1,4–β-glucanase binary complex''
Line 195: Line 205:
**[[4xeb]] - Endo-Gase – ''Penicillium funiculosum'' <br />
**[[4xeb]] - Endo-Gase – ''Penicillium funiculosum'' <br />
**[[4tuf]] - Endo-Gase – ''Xanthomonas campestris'' <br />
**[[4tuf]] - Endo-Gase – ''Xanthomonas campestris'' <br />
 +
**[[5jx5]], [[5jx6]] - Endo-Gase – ''Orpinomyces''<br />
*''Non-specific endo-glucanase binary complex''
*''Non-specific endo-glucanase binary complex''

Revision as of 09:21, 30 May 2018

Endo-1,3-β-glucanase complex with glycerol, phosphate and Ca+2 ion, 3atg

Drag the structure with the mouse to rotate

3D structures of glucanase

Updated on 30-May-2018

References

  1. ↑ Barras DR, Stone BA. Beta-1,3-glucan hydrolases from Euglena gracilis. I. The nature of the hydrolases. Biochim Biophys Acta. 1969 Nov 4;191(2):329-41. PMID:5354264
  2. ↑ Tsai LC, Amiraslanov I, Chen HR, Chen YW, Lee HL, Liang PH, Liaw YC. Structures of exoglucanase from Clostridium cellulovorans: cellotetraose binding and cleavage. Acta Crystallogr F Struct Biol Commun. 2015 Oct 1;71(Pt 10):1264-72. doi:, 10.1107/S2053230X15015915. Epub 2015 Sep 23. PMID:26457517 doi:http://dx.doi.org/10.1107/S2053230X15015915
  3. ↑ Vincken JP, Beldman G, Voragen AG. Substrate specificity of endoglucanases: what determines xyloglucanase activity? Carbohydr Res. 1997 Mar 13;298(4):299-310. PMID:9098958

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

Retrieved from "http://52.214.119.220/wiki/index.php/Glucanase"
Personal tools