Glucanase

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Line 20: Line 20:
**[[2hyk]] - Endo-Gase – ''Nococardiopsis''<br />
**[[2hyk]] - Endo-Gase – ''Nococardiopsis''<br />
**[[2cyg]] - Endo-Gase – ''Musa acuminate''<br />
**[[2cyg]] - Endo-Gase – ''Musa acuminate''<br />
-
**[[4k35]], [[4k3a]] - Endo-Gase – ''Rhizomucor miehei''<br />
+
**[[4k35]], [[4k3a]] - RmEndo-Gase – ''Rhizomucor miehei''<br />
**[[4dfs]] - Endo-Gase catalytic domain – ''Thermotoga petrophila''<br />
**[[4dfs]] - Endo-Gase catalytic domain – ''Thermotoga petrophila''<br />
-
**[[2cl2]] - Endo-Gase – ''Phanerochaete chrysosporium''<br />
+
**[[2cl2]] - PcEndo-Gase – ''Phanerochaete chrysosporium''<br />
**[[3ur7]], [[3ur8]] - pEndo-Gase – potato<br />
**[[3ur7]], [[3ur8]] - pEndo-Gase – potato<br />
**[[4bow]], [[4crq]] - ZgEndo-Gase catalytic domain (mutant) – ''Zobellia galactanivorans''<br />
**[[4bow]], [[4crq]] - ZgEndo-Gase catalytic domain (mutant) – ''Zobellia galactanivorans''<br />
Line 30: Line 30:
**[[5h9x]] - PbEndo-Gase – ''Paenibacillus barengoltzii'' <br />
**[[5h9x]] - PbEndo-Gase – ''Paenibacillus barengoltzii'' <br />
**[[4wzf]] - MtEndo-Gase – ''Mycobacterium tuberculosis''<br />
**[[4wzf]] - MtEndo-Gase – ''Mycobacterium tuberculosis''<br />
 +
**[[5m5z]], [[5m60]] - Endo-Gase – ''Chaetomium thermophilum''<br />
 +
**[[5h4e]] - Endo-Gase – ''Clodytidium beijerinckii''<br />
*''Endo-1,3– β-glucanase binary complex''
*''Endo-1,3– β-glucanase binary complex''
Line 36: Line 38:
**[[4bpz]], [[4cte]] - ZgEndo-Gase catalytic domain (mutant) + trisasccharide<br />
**[[4bpz]], [[4cte]] - ZgEndo-Gase catalytic domain (mutant) + trisasccharide<br />
**[[5h9y]] - PbEndo-Gase + laminarihexaose <br />
**[[5h9y]] - PbEndo-Gase + laminarihexaose <br />
 +
**[[5xbz]], [[5xc2]] - RmEndo-Gase + laminaripentaose <br />
*Endo-1,4-β-glucanase
*Endo-1,4-β-glucanase
Line 52: Line 55:
**[[2v3g]], [[2cip]], [[2bv9]], [[4im4]] - CtEndo-Gase H catalytic domain<br />
**[[2v3g]], [[2cip]], [[2bv9]], [[4im4]] - CtEndo-Gase H catalytic domain<br />
**[[2lro]], [[2lrp]] - CtEndo-Gase H CBM11 domain – NMR<br />
**[[2lro]], [[2lrp]] - CtEndo-Gase H CBM11 domain – NMR<br />
-
**[[2eqd]] - CtEndo-Gase (mutant) <br />
+
**[[2eqd]] - CtEndo-Gase 44A (mutant) <br />
-
**[[2eo7]] - CtEndo-Gase<br />
+
**[[2eo7]] - CtEndo-Gase 44A<br />
 +
**[[5gxx]], [[5gxz]], [[5gy0]], [[5gy1]] - CtEndo-Gase Q (mutant)<br />
**[[3qxf]] - EcEndo-Gase – ''Escherichia coli<''br />
**[[3qxf]] - EcEndo-Gase – ''Escherichia coli<''br />
**[[3amh]], [[1vho]] - TmEndo-Gase –'' Thermotoga maritima''<br />
**[[3amh]], [[1vho]] - TmEndo-Gase –'' Thermotoga maritima''<br />
Line 84: Line 88:
**[[1h1n]] - Endo-Gase – ''Thermoascus aurantiacus''<br />
**[[1h1n]] - Endo-Gase – ''Thermoascus aurantiacus''<br />
**[[3rjx]] - FnEndo-Gase – ''Fervidobacterium nodosum''<br />
**[[3rjx]] - FnEndo-Gase – ''Fervidobacterium nodosum''<br />
-
**[[3vl8]], [[3vl9]] - AaEndo-Gase – ''Aspergillus aculeatus''<br />
+
**[[3vl8]], [[3vl9]], [[5gm3]] - AaEndo-Gase – ''Aspergillus aculeatus''<br />
**[[4dod]] - CbEndo-Gase GH9 module – ''Caldicellulosiruptor bescii''<br />
**[[4dod]] - CbEndo-Gase GH9 module – ''Caldicellulosiruptor bescii''<br />
**[[4doe]] - CbEndo-Gase GH9 module + ligand<br />
**[[4doe]] - CbEndo-Gase GH9 module + ligand<br />
Line 100: Line 104:
**[[5czl]] - Endo-Gase – ''Raoultella ornithinolytica'' <br />
**[[5czl]] - Endo-Gase – ''Raoultella ornithinolytica'' <br />
**[[5cd2]] - Endo-Gase – ''Vibrio fischeri'' <br />
**[[5cd2]] - Endo-Gase – ''Vibrio fischeri'' <br />
 +
**[[5xbu]] - AcEndo-Gase – ''Ampullaria crossean''<br />
*''Endo-1,4–β-glucanase binary complex''
*''Endo-1,4–β-glucanase binary complex''
Line 113: Line 118:
**[[2bvd]] - CtEndo-Gase H catalytic domain + polysaccharide<br />
**[[2bvd]] - CtEndo-Gase H catalytic domain + polysaccharide<br />
**[[1cen]], [[4u5i]], [[4u5k]] - CtEndo-Gase catalytic domain (mutant) + polysaccharide<br />
**[[1cen]], [[4u5i]], [[4u5k]] - CtEndo-Gase catalytic domain (mutant) + polysaccharide<br />
 +
**[[5gxy]] - CtEndo-Gase Q (mutant) + cellobiose<br />
**[[3qxq]], [[2jen]] - EcEndo-Gase (mutant) + polysaccharide<br />
**[[3qxq]], [[2jen]] - EcEndo-Gase (mutant) + polysaccharide<br />
**[[3amm]] - TmEndo-Gase + polysaccharide<br />
**[[3amm]] - TmEndo-Gase + polysaccharide<br />
Line 130: Line 136:
**[[3rjy]] – FnEndo-Gase + glucose<br />
**[[3rjy]] – FnEndo-Gase + glucose<br />
**[[3vlb]] - AaEndo-Gase + protein EDGP<br />
**[[3vlb]] - AaEndo-Gase + protein EDGP<br />
 +
**[[5gm5]] - AaEndo-Gase (mutant) + cellobiose <br />
 +
**[[5gm4]] - AaEndo-Gase (mutant) + cellotetraose <br />
**[[3wdu]], [[3wdv]] - PtEndo-Gase + polysaccharide<br />
**[[3wdu]], [[3wdv]] - PtEndo-Gase + polysaccharide<br />
**[[3wdx]], [[3wdy]] - PtEndo-Gase (mutant) + polysaccharide<br />
**[[3wdx]], [[3wdy]] - PtEndo-Gase (mutant) + polysaccharide<br />
**[[5i79]] - AnEndo-Gase (mutant) + polysaccharide<br />
**[[5i79]] - AnEndo-Gase (mutant) + polysaccharide<br />
 +
**[[5xc4]], [[5xc8]], [[5xc9]], [[5xbx]] - AcEndo-Gase + cellobiose <br />
*Endo-1,3-1,4-β-glucanase
*Endo-1,3-1,4-β-glucanase
Line 138: Line 147:
**[[3o5s]] - BsEndo-Gase catalytic domain<br />
**[[3o5s]] - BsEndo-Gase catalytic domain<br />
**[[3i4i]] - Endo-Gase residues 26-242 – ''Bacterium''<br />
**[[3i4i]] - Endo-Gase residues 26-242 – ''Bacterium''<br />
-
**[[3d6e]] - BlEndo-Gase (mutant) – ''Bacillus licheniformis''<br />
+
**[[1gbg]], [[4yzt]], [[4yzp]] - BlEndo-Gase – ''Bacillus licheniformis''<br />
 +
**[[3d6e]] - BlEndo-Gase (mutant) <br />
**[[3h0o]], [[3hr9]], [[2r49]], [[3axd]] - FsEndo-Gase (mutant) – ''Fibrobacter succinogenes''<br />
**[[3h0o]], [[3hr9]], [[2r49]], [[3axd]] - FsEndo-Gase (mutant) – ''Fibrobacter succinogenes''<br />
**[[1zm1]], [[1mve]] - FsEndo-Gase<br />
**[[1zm1]], [[1mve]] - FsEndo-Gase<br />
**[[1aq0]] - bEndo-Gase – barley<br />
**[[1aq0]] - bEndo-Gase – barley<br />
-
**[[1gbg]] - BlEndo-Gase – <br />
 
**[[1glh]] - Endo-Gase – synthetic<br />
**[[1glh]] - Endo-Gase – synthetic<br />
**[[1ghr]], [[1ghs]] - Endo-Gase – ''Hordeum vulgare''<br />
**[[1ghr]], [[1ghs]] - Endo-Gase – ''Hordeum vulgare''<br />
Line 149: Line 158:
**[[3wdw]] – PtEndo-Gase (mutant)<br />
**[[3wdw]] – PtEndo-Gase (mutant)<br />
**[[4x0v]] - CbEndo-Gase GH5 module <br />
**[[4x0v]] - CbEndo-Gase GH5 module <br />
 +
**[[5h4r]] - CbEndo-Gase GH5 module (mutant) + cellotetraose<br />
*''Endo-1,3-1,4–β-glucanase binary complex''
*''Endo-1,3-1,4–β-glucanase binary complex''
Line 195: Line 205:
**[[4xeb]] - Endo-Gase – ''Penicillium funiculosum'' <br />
**[[4xeb]] - Endo-Gase – ''Penicillium funiculosum'' <br />
**[[4tuf]] - Endo-Gase – ''Xanthomonas campestris'' <br />
**[[4tuf]] - Endo-Gase – ''Xanthomonas campestris'' <br />
 +
**[[5jx5]], [[5jx6]] - Endo-Gase – ''Orpinomyces''<br />
*''Non-specific endo-glucanase binary complex''
*''Non-specific endo-glucanase binary complex''

Revision as of 09:21, 30 May 2018

Endo-1,3-β-glucanase complex with glycerol, phosphate and Ca+2 ion, 3atg

Drag the structure with the mouse to rotate

3D structures of glucanase

Updated on 30-May-2018

References

  1. ↑ Barras DR, Stone BA. Beta-1,3-glucan hydrolases from Euglena gracilis. I. The nature of the hydrolases. Biochim Biophys Acta. 1969 Nov 4;191(2):329-41. PMID:5354264
  2. ↑ Tsai LC, Amiraslanov I, Chen HR, Chen YW, Lee HL, Liang PH, Liaw YC. Structures of exoglucanase from Clostridium cellulovorans: cellotetraose binding and cleavage. Acta Crystallogr F Struct Biol Commun. 2015 Oct 1;71(Pt 10):1264-72. doi:, 10.1107/S2053230X15015915. Epub 2015 Sep 23. PMID:26457517 doi:http://dx.doi.org/10.1107/S2053230X15015915
  3. ↑ Vincken JP, Beldman G, Voragen AG. Substrate specificity of endoglucanases: what determines xyloglucanase activity? Carbohydr Res. 1997 Mar 13;298(4):299-310. PMID:9098958

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

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