Ribosome 3D structures

From Proteopedia

Revision as of 11:06, 24 February 2022

Updated on 24-February-2022 For a general description of the protein see Ribosome

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• 30S subunit + RNA

• • 5x8r – s30S ribosomal subunit – spinach - Cryo-EM
    
  • 2zm6, 1n36, 1j5e, 3oto, 5wnq, 5wnr, 5wns, 5wnt, 5wnu, 5wnv - Tt30S ribosomal subunit+THX+16S rRNA – Thermus thermophiles
    
  • 2vqe, 2vqf, 2uuc, 2e5l]], 2uu9, 2uua, 2uub, 6cao, 6caq, 6cas - Tt30S ribosomal subunit+16S rRNA+RNA fragment
    
  • 3i1m, 3i1o, 1i94, 1fka, 4dr1 - Tt30S ribosomal subunit+16S rRNA
    
  • 4duy, 4duz, 4dv0, 4dv1, 4dv2, 4dv3, 4dv4, 4dv5, 4dv6, 4dv7 - Tt30S ribosomal subunit+16S rRNA (mutant)
    
  • 4dr4, 4b3m, 4b3r, 4b3s, 4b3t - Tt30S ribosomal subunit+16S rRNA + mRNA
    
  • 6nqb, 6enf – Ec30S ribosomal subunit +16S rRNA – Escherichia coli
    
  • 6w6k, 6w77, 6w7m, 6w7n, 6w7w, 7af5, 7af8, 7afl, 7bod, 7boe, 7bof, 7bog, 7boh, 7boi, 7nar, 7nas, 7nat, 7nau, 7nav, 7nax, 7oe0, 7oe1 - Ec30S - Cryo EM
    
  • 6wu9, 6wua, 6wub - Ef30S – Enterococcus faecalis - Cryo EM
    
  • 6spc, 6spg, 6spe, 6spf, 6spb – Pa30S ribosomal subunit +16S RRNA – Pseudomonas aeruginosa – Cryo EM
    
  • 5xyu, 5o5j - Ms30S ribosomal subunit – Mycobacterium smegmatis - Cryo EM
    
  • 5xxu - 30S ribosomal subunit – Toxoplasma gondii - Cryo EM
    
  • 6v3e, 6ys5, 6yt9 – Ab30S – Acinetobacter baumannii - Cryo EM
    
  • 7bgd, 7bge, 7kwg – Sa30S – Staphylococcus aureus - Cryo-EM
    

• 30S subunit +tRNA+mRNA

• • 6vu3 – Ec30S + mRNA - Cryo EM
    
  • 3t1h, 3t1y - Tt30S ribosomal subunit+16S rRNA+tRNA Lys +mRNA
    
  • 6dti, 6mkn - Tt30S ribosomal subunit+16S rRNA+tRNA Arg +mRNA
    
  • 3v6u, 3v6v - Tt30S ribosomal subunit+16S rRNA+tRNA Phe+tRNA fMet+mRNA
    

• • 1xnq, 1xnr - Tt30S ribosomal subunit+THX+mRNA+tRNA anticodon+16S rRNA
    
  • 4gkj, 4gkk - Tt30S ribosomal subunit +16S rRNA +THX + mRNA + tRNA Met
    
  • 4jv5, 4jya, 4k0k - Tt30S ribosomal subunit +16S rRNA +THX + mRNA + ASL-tRNA
    

• 30S subunit +A-site tRNA

• • 2uxd, 2uxc - Tt30S ribosomal subunit+THX+A-site mRNA CGGG+tRNA anticodon+16S rRNA
    
  • 1n32, 1n33 - Tt30S ribosomal subunit+THX+A-site mRNA fragment+tRNA anticodon+16S rRNA
    
  • 1n34 - Tt30S ribosomal subunit+THX+A-site mRNA fragment +16S rRNA
    
  • 1xmo, 1xmq]] - Tt30S ribosomal subunit+THX+A-site mRNA+tRNA anticodon+16S rRNA
    
  • 2uxb - Tt30S ribosomal subunit+THX+A-site mRNA GGGU+tRNA anticodon+16S rRNA
    

• 30S subunit+P-site tRNA

**1ibk - Tt30S ribosomal subunit+THX+P-site mRNA fragment +16S rRNA

• • 2om7 – TtRPS2+TtRPS12+TtRPL1+ P-site tRNA+16S rRNA fragment+23S RRNA fragment
    
  • 5u4j – EcRPS3+EcRPS4+EcRPS5 + EcRPS12 + P-site tRNA+16S rRNA +23S rRNA + mRNA + RF-2 – Cryo EM
    
  • 5zeu - Ms30S ribosomal subunit + P-site tRNA f`Met +16S rRNA - Cryo EM
    

• 30S subunit+A-site tRNA+P-site tRNA

• • 1ibl, 1ibm - Tt30S ribosomal subunit+THX+A-site mRNA fragment+P-site mRNA fragment+tRNA anticodon+16S rRNA
    

• 30S subunit+A-site tRNA+P-site tRNA+E-site tRNA

• • 1jgo, 1jgp, 1jgq - Tt30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+tRNA Phe+mRNA +16S rRNA
    

• 30S subunit + antibiotics

• • 1i95, 1i97, 2hhh, 2f4v, 4dr3, 6cap, 6car - Tt30S ribosomal subunit+16S rRNA+antibiotic
    
  • 1hnx, 1hnw, 1hnz, 1fjg, 4aqy, 4dr5, 4dr6, 4dr7, 4khp, 7dug, 7duh 7dui, 7duj, 7duk, 7dul - Tt30S ribosomal subunit+16S rRNA+mRNA fragment+antibiotic
    
  • 3knj, 3knh - Tt30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S rRNA+ antibiotic
    
  • 6mpf, 6mpi - Tt30S ribosomal subunit +A-site tRNA-Arg +mRNA +16S rRNA+ antibiotic
    
  • 6ypu, 6ytf, 7m4u – Ab30S + antibiotic - Cryo EM
    

• 30S subunit + ribosome recycling factor

• • 3r8n, 3r8o - Ec30S ribosomal subunit+16S rRNA+ribosome recycling factor + mRNA + tRNA
    

• 30S subunit + elongation factor

• • 4btc - Tt30S ribosomal subunit+THX+RNA +16S rRNA+elongation factor G
    
  • 6enu - Ec30S ribosomal subunit+THX+RNA +16S rRNA+elongation factor P – Cryo EM
    

• 30S subunit + translation initiation factor

• • 1hr0 - Tt30S ribosomal subunit+THX+IF+16S rRNA
    
  • 1i96 - Tt30S ribosomal subunit+THX+IF3+16S rRNA
    
  • 6o7k - Ec30S ribosomal subunit+THX+IF1 + IF2 +16S rRNA - tRNA + mRNA – Cryo EM
    

• 30S subunit + various proteins

• • 1x18 – TtRPS2+TtRPS7+TtRPS11+TtRPS18+GTP-binding protein ERA+RNA fragments
    
  • 6ny6 - Tt30S ribosomal subunit + toxin YoeB
    
  • 2ykr - EcRPS2 + 16S rRNA + GMPPNP + GTPase RSGA
    
  • 4a2i - EcRPS2 + 16S rRNA + GTPase RSGA – Cryo EM
    
  • 4adv - EcRPS2 + 16S rRNA + methyltransferase – Cryo EM
    
  • 5uz4, 5no3, 5no2 - Ec30S ribosomal subunit+ BS6 + US7 + GTPase RsgA +16S rRNA – Cryo EM
    
  • 6awb, 6awc, 6awd - Ec30S ribosomal subunit + RNA polymerase - Cryo EM
    
  • 7o5h - Ec30S + KsgA - Cryo EM
    
  • 6dzk - Ms30S ribosomal subunit + HPF +16S rRNA - Cryo EM
    
  • 6tmf - 30S ribosomal subunit + RNA-binding protein + L7AE + L41E + ATPase +16S rRNA – Thermococcus celer - Cryo EM
    

• 40S ribosomal subunit

• • 6g4s, 6g53, 6g18, 6g51, 6g5i, 6zuo, 6zv6, 6zxd, 6zxe, 6zxf, 6zxg, 6zxh - h40S ribosomal subunit - Cryo-EM
    
  • 6nd4, 6rbd, 5wlc, 5tzs- y40S ribosomal subunit – yeast - Cryo-EM
    

• 40S ribosomal subunit complex

• • 6nf8, 6neq - h40S ribosomal subunit + translation initiation factor 3 - Cryo-EM
    
  • 5oa3 - h40S ribosomal subunit + translation initiation factor 2D - Cryo-EM
    
  • 6g4w - h40S ribosomal subunit + PNO1 + bystin + TSR1 + tRNA methyltransferase - Cryo-EM
    
  • 6g5h - h40S ribosomal subunit + RACK1 - Cryo-EM
    
  • 6zlw, 6zmt, 6zn5, 6zoj, 6zok, 6zol, 7k5i - h40S + SARS Nsp1 - Cryo-EM
    
  • 5vyc - h40S ribosomal subunit + DENR-MCT-1 - Cryo-EM
    
  • 4kzx - r40S ribosomal subunit+ RACK1 + EIF1 – rabbit – Cryo-EM
    
  • 4kzy - r40S ribosomal subunit+ RACK1 + EIF1 + EIF1A – Cryo-EM
    
  • 4kzz - r40S ribosomal subunit+ RACK1 + EIF1A + initiator tRNA – Cryo-EM
    
  • 6p4g, 6p4h, 6w2s, 6w2t - r40S ribosomal subunit + virus IRES – Cryo-EM
    
  • 7jqb - r40S + SARS Nsp1 - Cryo-EM
    
  • 7jqc - r40S + SARS Nsp1 + virus IRES - Cryo-EM
    
  • 4bts - r40S ribosomal subunit+ 18SrRNA + EIF1 + EIF1A
    
  • 6fai, 6y7c - y40S ribosomal subunit + PNO1 + 20S rRNA + TSR1 + LTV1 + RIO2 - Cryo-EM
    
  • 6wdr - y40S ribosomal subunit + RACK1 + 20S rRNA + TSR1 - Cryo-EM
    
  • 6eml - y40S ribosomal subunit + PNO1 + 20S rRNA + TSR1 + LTV1 + RIO2 + essential nuclear protein 1 – Cryo-EM
    
  • 6rbe, 6rbd - y40S ribosomal subunit + TSR1 – Cryo-EM
    
  • 6zvi - y40S + Mbf1 – Cryo-EM
    
  • 6nd4 - y40S ribosomal subunit + SOF1 + IMP3 + MPP10 + BUD21 + NOP56 + NOP58 + NOP1 + SNU13 + RRP9 + FAF1 – Cryo-EM
    
  • 4v5o - Tet40S ribosomal subunit+RACK1 – Tetrahymena thermophila
    
  • 5xyi - Tv40S ribosomal subunit+ RACK1 – Trichomonas vaginalis - Cryo-EM
    
  • 5opt – Tc40S ribosomal subunit + KSRP – Trypanosoma cruzi - Cryo-EM
    
  • 6okk – Pf40S ribosomal subunit + antibiotics – Plasmodium falciparum - Cryo-EM
    

• 43S preinitiation

• • 6zvj, 7a09 – h43S + ABCE-1 - Cryo_EM
    
  • 6zon, 6zp4 – h43S + SARS Nsp1 - Cryo_EM
    
  • 6zce, 7a1g – y43S + ABCE-1 - Cryo_EM
    
  • 7ase – Tc43S + helicase - Cryo_EM
    

• 48S preinitiation

• • 6fec, 6ybs, 6ybw, 6zmw – h48S - Cryo_EM
    
  • 6ybd – h48S + eIF3 - Cryo_EM
    
  • 6yal, 6yan – r48S + IF-3 + mRNA - Cryo_EM
    
  • 6yam – r48S + mRNA - Cryo_EM
    
  • 6gsm, 6gsn – y48S - Cryo_EM
    
  • 6fyx, 6fyy – y48S + IF-5 - Cryo_EM
    
  • 6zu9 – y48S + ABCE-1 - Cryo_EM
    

*50S subunit

• • 2ftc – b50S subunit – bovine - Cryo_EM
    
  • 5x8t – s50S ribosomal subunit - Cryo-EM
    
  • 3kni, 3knk, 3knm, 3kno, 3v6w, 3v6x, 3zne, 4k0m, 4k0q - Tt50S subunit
    
  • 3i1n, 3i1p - Ec50S subunit
    
  • 6gbz, 6gc0, 6gc4, 6gc6, 6gc7, 6gc8, 6ofx, 6wnt, 7bv8, 7lv0, 7lvk - Ec50S subunit - Cryo_EM
    
  • 2zjq, 2zjr, 1nkw - Dr50S subunit – Deinococcus radiodurans
    
  • 2qa4, 3cc2, 1s72, 4v9f, 1kqs, 1qvg, 1jj2, 1ffk, 3cc7, 3cce, 3ccj, 3ccl, 3ccm, 3ccq, 3ccr, 3ccs, 3ccu, 3ccv, 1yj9 - Hm50S subunit – Haloarcula marismortui
    
  • 3iy9 – Lm50S subunit - Leishmania major
    
  • 7am2 – Lm50S + ATP + GTP – Cryo EM
    
  • 3j3v, 3j3w - Bs50S subunit – Bacillus subtilis
    
  • 6ppf, 6pvk – Bs50S subunit – Cryo-EM
    
  • 6spd – Pa50S subunit – Cryo-EM
    
  • 6s12, 6hma, 7asm, 7asn, 7aso – Sa50S - Cryo-EM
    
  • 5zet, 6dzp, 5o60, 5xym – Ms50S ribosomal subunit - Cryo EM
    
  • 6v3d – Ab50S - Cryo EM
    

*50S subunit + antibiotics

• • 7a0r, 7a18 - Dr50S + antibiotic
    
  • 3dll, 2zjp, 3cf5, 1xbp, 1sm1, 1nwx, 1nwy, 3pio, 3pip - Dr50S subunit +general stress protein Ctc+ antibiotic
    

4io9, 4ioa, 4ioc - Dr50S subunit + antibiotics

• • 6u48 - Ec50S subunit + antibiotics
    
  • 6pc5, 6wyv, 6xz7, 6xza, 6xzb - Ec50S + antibiotics – Cryo EM
    
  • 6qul - Ec50S subunit + P-site tRNA-fMet + antibiotics
    
  • 6az1, 6az3 – Lm50S subunit + antibiotics – Cryo EM
    
  • 6s0z, 6ddd, 6ddg, 6wqn, 6wqq, 6wrs – Sa50S subunit + antibiotics – Cryo EM
    
  • 3i55, 3i56 , 3g4s, 3g4e, 3g71, 2qex, 3cc4, 3cd6, 1yhq, 1yi2, 1yij, 1yjn, 1yjw, 2otj, 2otl, 1yit, 1k73, 1kc8, 1k8a, 1k9m, 1kd1, 1m1k, 3cpw, 1yit, 1q7y, 1q81, 1q82, 1n8r, 1nji, 3cxc - Hm50S subunit + antibiotics
    
  • 5v7q – Mt50S subunit + antibiotic – Mycobacterium tuberculosis – Cryo EM
    
  • 6yhs, 6ysi, 7m4v – Ab50S + antibiotic - Cryo EM
    

*50S subunit + ribosome releasing factor (RRF)

• • 2rdo - Ec50S subunit +EF-G+RRF – Cryo-EM
    
  • 3j0d - Tt50S subunit+RRF – Cryo-EM
    

*50S subunit + various proteins

• • 2j28 - Ec50S subunit +signal recognition particle – Cryo-EM
    
  • 6i0y - Ec50S subunit + tRNA – Cryo-EM
    
  • 6s0k - Ec50S subunit + tRNA + SecA + RodZ – Cryo-EM
    
  • 5o2r - Ec50S subunit + antimicrobial peptide – Cryo-EM
    
  • 5ot7 - Ec50S subunit + EF-G – Cryo-EM
    
  • 6ys3 - Ec50S + peptide – Cryo-EM
    
  • 7bl2, 7bl3 - Ec50S + ObgE – Cryo-EM
    
  • 7bl6 - Ec50S+ ObgE + GMPPNP – Cryo-EM
    
  • 7bl4 - Ec50S + ObgE + GMPPNP + RsfS – Cryo-EM
    
  • 1w2b - Hm50S subunit +trigger factor N-terminal
    
  • 1qvf- Hm50S subunit + deacylated tRNA minihelix
    
  • [1q86]] - Hm50S subunit +CCA-Phe-caproic acid-biotin
    
  • 3cma, 3cme, 1vq8, 1vq9, 1m90 - Hm50S subunit +CCA+CCA-Phe-CAP-BIO
    
  • 1vq4, 1vq5, 1vq7, 1vql, 1vqm, 1vqp – Hm50S subunit +transition state analog
    
  • 1vq6, 1vqk, 1vqn – Hm50S subunit + c-hpmn+CCA-Phe-caproic acid-biotin
    
  • 1vqo – Hm50S subunt + CCPMN
    
  • 6ppk - Bs50S subunit + ribosome biogenesis GTPase A – Cryo EM
    
  • 6ha8 - Bs50S subunit + VmlR – Cryo EM
    
  • 6htq - Bs50S subunit + RelA – Cryo EM
    
  • 6szs - Bs50S subunit + BrfA – Cryo EM
    
  • 7aqc, 7aqd, 7as8, 7as9, 7ope - Bs50S + tRNA + Rqc – Cryo EM
    
  • 7kgb - Mt50S + SEQ-9 – Cryo EM
    

• 60S subunit

• • 6n8j, 6n8k, 6n8l, 6n8m, 6n8n, 6n8o, 6qik, 6qt0, 6qtz, 6r86, 6ri5, 6rzz, 6s05 – y60S subunit - Cryo EM
    
  • 5tzs, 5no4 – y60S subunit processome – Cryo EM
    
  • 5xxb – Tg60S ribosomal subunit - Cryo-EM
    
  • 5xy3 – Tv60S ribosomal subunit - Cryo-EM
    
  • 5t5h – Tc60S ribosomal subunit - Cryo-EM
    
  • 6yxy – Tb60S - Cryo-EM
    

• 60S subunit + various proteins

• • 3j3b – h60S subunit + P0 + P1 + P2 - Cryo EM
    
  • 3izs – y60S subunit + P0 + P1 + P2 - Cryo EM
    
  • 4v8t – y60S subunit + P0 + P1 + P2 + ARX1 - Cryo EM
    
  • 3o5h – y60S subunit + 5S rRNA + 5.8S rRNA + 25S rRNA + P0
    
  • 6em5, 6em4, 6em3, 6elz, 6em1 – y60S ribosomal subunit + BRX1 + 5.8S rRNA + 25S RNA + CIC1 + ERB1 + HAS1 + MRT4 + NIP7 + ribosome biogenesis proteins + EIF-6 + nucleolar proteins – Cryo-EM
    
  • 6cb1, 6c0f, 5z3g – y60S ribosomal subunit + 5.8S rRNA + 25S RNA + CIC1 + HAS1 + MRT4 + NIP7 + ribosome biogenesis proteins + RNA-processing protein + nucleolar proteins + pescadillo homolog – Cryo-EM
    
  • 6r87, 6r84 – y60S subunit + Vms1 – Cryo EM
    
  • 5t6r, 5t62 – y60S subunit + Nmd3 – Cryo EM
    
  • 6ft6 – y60S ribosomal subunit + NOP53 – Cryo-EM
    
  • 6ylg, 6ylh, 6ylx, 6yly, 7bl5, 7bt6, 7btb – ypre-60S – Cryo-EM
    
  • 5anc, 5anb, 5an9 – sm60S subunit + P0 + SbdS + EF-Tu – slime mold - Cryo EM
    
  • 6qkl – sm60S subunit + P0 + SbdS + EIF-6 - Cryo EM
    
  • 3j39 – Dm60S subunit + P0 – Drosophila melanogaster - Cryo EM
    
  • 4v8p - Tet60S subunit+ 26S rRNA+ translation initiation factor 6
    

• 70S ribosome

• • 4v61, 5x8p, 5mlc – sRibosome - Cryo-EM
    
  • 4v4q, 4v9d, 6c4i, 6c4h, 6by1 - EcRibosome
    
  • 5uyq, 5uyk, 5uyl, 5uym, 5uyn, 5uyp, 5uyq, 6o9j, 6o9k, 6ore, 6orl, 6hrm, 4v69, 4v48, 4v4a, 6bu8, 6wnv, 6wnw, 6ysr, 6ztn, 6zto, 6ztp, 6ztm, 6zu1, 7abz, 7ac7, 7acj, 7acr, 7cpj, 7k00, [[[7n1p]], [7n2u]], 7n30, 7n31, 7oi0, 7oif, 7oig, 7oii, 7ot5 – EcRibosome - Cryo-EM
    
  • 4v6c, 4v6d, 4v6e – EcRibosome ratcheting
    
  • 4v4v – EcRibosome pre-translocational – Cryo-EM
    
  • 4v4w – EcRibosome SecM-stalled – Cryo-EM
    
  • 4v65 – EcRibosome pre-accomodation – Cryo-EM
    
  • 4v66 – EcRibosome post-accomodation – Cryo-EM
    
  • 4v4i, 4v83, 4v84, 4v4s, 4v4x, 4v4z, 4v90, 4v42, 6c5l, 6ucq – TtRibosome
    
  • 6gzq, 6qnq, 6qnr – TtRibosome - Cryo-EM
    
  • 4v8j, 4v97, 6buw, 6bz6 – TtRibosome ram mutation
    
  • 4v8n – TtRibosome agmatidine mutation
    
  • 4v4y, 4v4j – TtRibosome Shine-Dalgarno duplex
    
  • 4v5m – TtRibosome pre-translocational – Cryo-EM
    
  • 4v5n – TtRibosome post-translocational – Cryo-EM
    
  • 5v8i – TtRibosome – rps17
    
  • 4v8m - TbRibosome – Trypanosoma brucei - Cryo-EM
    
  • 4v6u – Ribosome – Pyrococcus furiosus - Cryo-EM
    
  • 5zep, 5zeb, 5o61 – MsRibosome - Cryo-EM
    
  • 5tcu, 6s13, 5t7v, 6yef, 7asp, 7nhl, 7nhm – SaRibosome - Cryo-EM
    
  • 6rm3 - Ribosome – Valrimorpha necatrix - Cryo-EM
    
  • 6w6p - EfRibosome - Cryo-EM
    
  • 7o5b - BsRibosome - Cryo-EM
    
  • 7qep - Ribosome – Encephalitozoon cuniculi - Cryo-EM
    
  • 6v3b – AbRibosome - Cryo EM
    
  • 7jil – Ribosome – Flavobacterium johnsoniae - Cryo EM
    

• 70S ribosome complex with mRNA

• • 4v50 – EcRibosome + mRNA
    
  • 4v6n, 4v6o, 4v6p, 4v6q, 4v6r, 4v6s, 6vyu, 6vz3, 6vzj, 7jss, 7jsw, 7jsz – EcRibosome + mRNA – Cryo-EM
    
  • 6vyz – EcRibosome + mRNA + NusA + P-tRNA + E-tRNA – Cryo-EM
    
  • 6vyq, 6vyr, 6vys, 6vyt, 6vyw, 6vyx, 6vyy, 6vz2, 6vz5, 6vz7, 6xgf, 6xii, 6xij, 6ztj – EcRibosome + mRNA + NusG + tRNA – Cryo-EM
    
  • 6x6t, 6x7f, 6x7k, 6x9q, 6xdq, 6xdr – EcRibosome + mRNA + NusA + NusG + P-tRNA + E-tRNA – Cryo-EM
    
  • 6ysu, 7jt2 – EcRibosome + mRNA + ArfB-2 – Cryo-EM
    
  • 7jt1, 7jt3 – EcRibosome + mRNA + ArfB-1 + ArfB-2 – Cryo-EM
    
  • 4v6f, 4v6g , 4v87, 4v8b , 4v8d, 4v8e, 4v9i – TtRibosome + mRNA
    
  • 4v4t – TtRibosome + stop codon
    
  • 4v4p – TtRibosome + mRNA operator
    

• 70S ribosome complex with antibiotic

• • 4v52, 4v53, 4v56, 4v57, 4v64, 4v4h, 4v7s, 4v7t, 4v7u, 4v7v, 4www – EcRibosome + antibiotic
    
  • 6y69, 6y6x, 7n2v, 7s1g, 7s1h, 7s1k – EcRibosome + antibiotic – Cryo EM
    
  • 7b5k, 7nso, 7nsq, 7nsq – EcRibosome + tRNA + antibiotic – Cryo EM
    
  • 6b4v – EcRibosome + RF-1 + antibiotic
    
  • 4v55, 4v5y – EcRibosome + antibiotic + RRF
    
  • 4v51, 4v5c, 4v5d, 4v7w, 4v7x, 4v7y, 4v7z, 4v8a, 4v9c, 6czr, 7md7 – TtRibosome + antibiotic
    
  • 4v8c, 4v8f, 4v9a, 4v9b, 4v9c – TtRibosome + mRNA + antibiotic
    
  • 5w4k, 5wis, 5wit, 6nd5, 6nd6, 6o97, 6of1, 6cae, 5vp2, 6xhv, 6xhw, 6xhy, 6xqd, 6xqe, 7lh5, 7rq8, 7rq9 – TtRibosome + tRNA + mRNA + antibiotic
    
  • 7rqd – TtRibosome + A-site tRNA + P-site tRNA + protein Y + antibiotic
    
  • 6boh – TtRibosome + RF-1 + antibiotic
    
  • 6xhh – TtRibosome + protein Y + antibiotic
    
  • 4v7l, 4v7m – Ribosome + antibiotic – Streptomyces puniceus
    
  • 5v93 – MtRibosome + antibiotic – Cryo EM
    
  • 6ha1 – BsRibosome + antibiotic – Cryo EM
    
  • 6s0x, 7p48 – SaRibosome + antibiotic – Cryo EM
    
  • 7m4w, 7m4z, 7ryh – AbRibosome + antibiotic - Cryo EM
    
  • 7m4x, 7m4y, 7ryf, 7ryg – AbRibosome + antibiotic + tRNA - Cryo EM
    

• 70S ribosome complex with release factor

• • 6eri – sRibosome + RRF + hibernation promoting factor - Cryo-EM
    
  • 4v5a – TtRibosome + RRF
    
  • 4v63, 4v7p, 6bok – TtRibosome + RF-1
    
  • 4v5e, 4v4r, 4v67, 4v9n – TtRibosome + RF-2
    
  • 4v5j – TtRibosome + RF-2 + substrate analog
    
  • 4v8o – TtRibosome + RF-3
    
  • 4v54 – EcRibosome + RRF
    
  • 6dnc, 6osk, 6osq – EcRibosome + RF-1 – Cryo-EM
    
  • 6ouo, 6og7, 6ogf, 6ogg, 6ogi, 6ot3, 6ost, 7oj0 – EcRibosome + RF-2 – Cryo-EM
    
  • 7o1c – EcRibosome + RF-2 + Tnac peptide – Cryo-EM
    
  • 5u4i, 5u9f, 5u9g – EcRibosome + RF-2 + ArfA – Cryo-EM
    
  • 4v89 – EcRibosome + RF-3
    
  • 6gxp – EcRibosome + RF-3 – Cryo EM
    
  • 4v85 – EcRibosome + RF-3 + mRNA + antibiotic
    
  • 6gwt, 6gxm, 6gxn, 6gxo – EcRibosome + RF-1+ RF-3 + P-site tRNA – Cryo-EM
    

• 70S ribosome complex with various proteins

• • 4v5b – EcRibosome + PDF-binding helix
    
  • 4v5h – EcRibosome + Tnac leader peptide
    
  • 7pjs, 7pjt – EcRibosome + tRNA – Cryo EM
    
  • 7o1a, 7o19, 7oiz, 7p3k – EcRibosome + Tnac leader peptide – Cryo EM
    
  • 4v6v - EcRibosome+ tetracycline resistance protein + mRNA + P-tRNA – Cryo-EM
    
  • 6vwl, 6vwm, 6vwn – EcRibosome + HIV FSS – Cryo-EM
    
  • 7d6z – EcRibosome + peptide deformylase + trigger factor – Cryo-EM
    
  • 7d80 – EcRibosome + peptide deformylase + trigger factor + Met aminopeptidase – Cryo-EM
    
  • 4v6m – EcRibosome + SecYE – Cryo-EM
    
  • 4v4g – EcRibosome + protein Y – Cryo-EM
    
  • 7nww – EcRibosome + CspA – Cryo-EM
    
  • 7nwt – EcRibosome + virus protein – Cryo-EM
    
  • 6xe0, 6ztl – EcRibosome + NusG – Cryo-EM
    
  • 4v7i – EcRibosome +preprotein translocase – Cryo-EM
    
  • 4v49 - EcRibosome +general stress protein Ctc – Cryo-EM
    
  • 4v8g, 4v8h – TtRibosome + modulation factor
    
  • 4v8i - TtRibosome + ribosome-associated inhibitor
    
  • 4v95 – TtRibosome + YAEJ
    
  • 4v5k – TtRibosome + colicin E3
    
  • 4v7j, 4v7k – TtRibosome + toxin RelE
    
  • 6otr, 6oxa, 6oxi - TtRibosome + toxin YoeB
    
  • 6cfk – TtRibosome + His-CAM + YfiA
    
  • 6cfl – TtRibosome + Lys-CAM + YfiA
    
  • 6fkr – TtRibosome + Tur1A
    
  • 7jql, 7jqm – TtRibosome + mRNA + tRNA + antimicrobial peptide
    
  • 5zlu – TtRibosome + ABC-F – Cryo-EM
    
  • 6dzi – MsRibosome + MPY – Cryo-EM
    
  • 7msc, 7msh, 7msm, 7msz – MtRibosome + Etta – Cryo-EM
    
  • 7nhn – Ribosome + ABCF – Listeria monocytogenes – Cryo-EM
    
  • 6v39, 6v3a – AbRibosome + tRNA – Cryo EM
    
  • 7p7u - EfRibosome + P-tRNA - Cryo-EM
    
  • 7nhk – EfRibosome + LsaA – Cryo EM
    
  • 7p7q, 7p7s, 7p7t – EfRibosome + ABCF – Cryo-EM
    

• 70S ribosome complex with tRNA mRNA

• • 6gsj, 6gsk, 6gsl – TtRibosome + A-site tRNA-Thr + mRNA + tRNA-fMet
    
  • 6n1d – TtRibosome + mRNA + tRNA
    
  • 6bz7, 6bz8 – TtRibosome + A-site tRNA-Leu
    
  • 5vpo, 5vpp, 6ndk – TtRibosome + tRNA-SufA6
    
  • 6n9e, 6n9f – TtRibosome + mRNA + P-site tRNA
    
  • 6uo1 – TtRibosome + mRNA + A-site tRNA + P-site tRNA + E-site tRNA
    
  • 6q95, 6q97 – TtRibosome + A-site tRNA – Cryo-EM
    
  • 6q98 – TtRibosome + P-site tRNA – Cryo-EM
    
  • 6q9a – TtRibosome + E-site tRNA – Cryo-EM
    
  • 5uq7 – TtRibosome + A-site tRNA + dnaX – Cryo-EM
    
  • 5uq8 – TtRibosome + E-site tRNA + dnaX – Cryo-EM
    
  • 6cfj – TtRibosome + His-CAM + A-site tRNA + P-site tRA + E-site tRNA + mRNA + antibiotic
    
  • 7mt2, 7mt3, 7mt7 – MtRibosome + P-tRNA + E-tRNA – Cryo-EM
    
  • 7pju – EcRibosome + A-tRNA + P-tRNA + E-tRNA – Cryo-EM
    

• 70S ribosome complex with elongation factor

• • 4v9o – EcRibosome + EF-G
    
  • 4v47, 7k50, 7k51, 7k52, 7k53, [7k54]], 7k55, 7n2c – EcRibosome + EF-G – Cryo-EM
    
  • 4v9p – EcRibosome + antibiotic + EF-G
    
  • 7pjv, 7pjw, 7pjx, 7pjy, 7pjz – EcRibosome + A-tRNA + P-tRNA + E-tRNA + EF-G – Cryo-EM
    
  • 4v6t – EcRibosome + EF-G + tRNA-SmpB – Cryo-EM
    
  • 4v6k, 4v6l – EcRibosome + EF-Tu
    
  • 5wdt, 5we4, 6wd0, 6wd1, 6wd2, 6wd3, 6wd4, 6wd5, 6wd6, 6wd7, 6wd8, 6wd9, 6wda, 6wdb, 6wdc, 6wdd, 6wdf, 6wdg, 6wdh, 6wdi, 6wdj, 6wdl, 6wdm– EcRibosome + EF-Tu – Cryo-EM
    
  • 4v5l – EcRibosome + EF-Tu + tRNA
    
  • 5wfk, 5wf0, 5wfs – EcRibosome + EF-Tu + tRNA – Cryo EM
    
  • 5we6 – EcRibosome + EF-Tu + tRNA + GTP – Cryo-EM
    
  • 6enj – EcRibosome + EF-P + A-site tRNA + P-site tRNA – Cryo-EM
    
  • 4v5f, 4v8u, 4v9h – TtRibosome + EF-G
    
  • [[4v56a] – TtRibosome + EF-P
    
  • 4v5g – TtRibosome + EF-Tu
    
  • 4v8q – TtRibosome + antibiotic + EF-Tu
    
  • 4v68 – TtRibosome + antibiotic + EF-Tu – Cryo-EM
    
  • 4v5p, 4v5q, 4v5r, 4v5s – TtRibosome + EF-Tu + tRNA-Trp
    
  • 4v9j, 4v9k, 4v9l, 4v9m – TtRibosome + -EF-G + tRNA
    
  • 4v9l – TtRibosome + EF-G + antibiotic + tRNA
    

• 80S ribosome

• • 5t2c, 6ip5, 6ek0, 6qzp, 6w6l, 6y0g, 6y2l, 6y57, 7bhp – hRibosome - Cryo-EM
    
  • 4v5z - dRibosome – dog - Cryo-EM
    
  • 6hcm, 6hcq, 6sgc, 6hcf, 6gz3, 6gz4, 6gz5, 7mdz, 7o7y, 7o7z, 7o81 – rRibosome - Cryo-EM
    
  • 7cpu, 7cpv - mRibosome - Cryo-EM
    
  • 6xu6, 6xu7, 6xu8 – DmRibosome - Cryo-EM
    
  • 4v7e – Ribosome – wheat - Cryo-EM
    
  • 4v7r, 4v88 – yRibosome
    
  • 4v6i, 6t7t, 6t7i, 6t83, 6t4q, 6i7o, 6i7v, 6xiq – yRibosome - Cryo-EM
    
  • 6zj3 – Ribosome – Euglena gracilis - Cryo-EM
    
  • 5t2a – LdRibosome – Leishmania donovani - Cryo-EM
    
  • 7r81 – NcRibosome + cycloheximide – Neurospora crassa - Cryo-EM
    
  • 7olc, 7old – CtRibosome – Chaetomium thermophilum - Cryo-EM
    

• 80S ribosome complexes

• • 6r6p – hRibosome + XBP1u - Cryo-EM
    
  • 6zvh – hRibosome + EDF1 - Cryo-EM
    
  • 6z6n – hRibosome + EBP1 - Cryo-EM
    
  • 6z6m – hRibosome + EBP1 +EF-2 + SERBP1 - Cryo-EM
    
  • 6z6l – hRibosome + CCDC124 - Cryo-EM
    
  • 6zm7 – hRibosome + CCDC124 + EBP1 - Cryo-EM
    
  • 6z6e – hRibosome + CCDC124 + SARS Nsp1 - Cryo-EM
    
  • 6zmi – hRibosome + SARS Nsp1 - Cryo-EM
    
  • 6zmo – hRibosome + EF-1 + SARS Nsp1 - Cryo-EM
    
  • 6olg, 6oli – hRibosome + drug - Cryo-EM
    
  • 6olz, 6xa1 – hRibosome + tRNA + drug - Cryo-EM
    
  • 6ole, 6olf, 6om0, 6om7 – hRibosome + A-site tRNA + P-site tRNA + drug - Cryo-EM
    
  • 7nfx – hRibosome + SRP + SRP receptor - Cryo-EM
    
  • 6fti, 6ftj - dRibosome + oligosaccharyltransferase + Sec61 - Cryo-EM
    
  • 6ftg - dRibosome + OST - Cryo-EM
    
  • 3j0l, 3j0o, 3j0p, 3j0q - rRibosome+ mRNA – Cryo-EM
    
  • 6mte, 6mtd – rRibosome + EF2 + SERBP1 - Cryo-EM
    
  • 6d9j, 6d90 – rRibosome + RF-1 + P-site tRNA - Cryo-EM
    
  • 7o80 – rRibosome + RF-1 +ABCE-1 - Cryo-EM
    
  • 7nwg – rRibosome + A-tRNA + P-site tRNA + E-tRNA + antibiotic- Cryo-EM
    
  • 6frk – rRibosome + SRP + SRP receptor - Cryo-EM
    
  • 6hcj – rRibosome + A-site tRNA + P-site tRNA - Cryo-EM
    
  • 6mtb – rRibosome + P-site tRNA + Z-site tRNA - Cryo-EM
    
  • 6mtc – rRibosome + Z-site tRNA + IFRD2 - Cryo-EM
    
  • 6r5q – rRibosome + XBP1u - Cryo-EM
    
  • 6r6g – rRibosome + XBP1u + SRP - Cryo-EM
    
  • 6r7q – rRibosome + XBP1u + Sec61 - Cryo-EM
    
  • 6t59 – rRibosome +b-tubulin- Cryo-EM
    
  • 6z6j, 6z6k – rRibosome + Lso2 - Cryo-EM
    
  • 7nwh, 7nwi – rRibosome + antibiotic – Cryo EM
    
  • 6p5i, 6p5j, 6p5k, 6p5n, 6ip6, 6ip8, 6zvk, 7a01 - rRibosome + IRES – Cryo-EM
    
  • 4v6w - DmRibosome + EF2 + guanine nucleotide-binding protein – Cryo-EM
    
  • 7ls1, 7ls2 – mRibosome + EF2 - Cryo-EM
    
  • 7osa, 7osm – yRibosome + EF2 + GTP
    
  • 4v4b – yRibosome + EF2 + antifungal - Cryo-EM
    
  • 6gqv, 6gqb, 6gq1 – yRibosome + EF2 + mRNA + tRNA - Cryo-EM
    
  • 5tga, 5tgm – yRibosome + A-site tRNA-Pro
    
  • 5tbw, 5obm, 5on6 – yRibosome + antibiotic
    
  • 7azy – yRibosome + antibiotic – Cryo EM
    
  • 6hd7 – yRibosome + NatA – Cryo EM
    
  • 6s47 – yRibosome + New1 – Cryo EM
    
  • 6hhq – yRibosome + C45 – Cryo EM
    
  • 6q8y – yRibosome + Xrn1 – Cryo EM
    
  • 7rr5 – yRibosome + Rbg1 + Tma46 – Cryo EM
    
  • 6xir – yRibosome + ubiquitin – Cryo EM
    
  • 7of1, 7oh3, 7ohq, 7ohp, 7ohr, 7ohs, 7oht, 7ohu, 7ohv, 7ohw, 7ohx, 7ohy – yRibosome + Nog1-TAP – Cryo EM
    
  • 6woo – yRibosome + tRNA-Met + eIF5B + GDP – Cryo EM
    
  • 7b7d – yRibosome + A-tRNA + P-tRNA + EF3 – Cryo EM
    
  • 7nrc, 7nrd – yRibosome + Gcn1 + A-tRNA + P-tRNA + eIF5A + Rbg2 + Gir2 – Cryo EM
    
  • 6zu5 – Ribosome + Lso2 – Paranosema locustae - Cryo-EM
    
  • 4v7h - TlRibosome+P-site tRNA – Thermomyces lanuginosus
    
  • 5umd – PfRibosome + mefloquin - Cryo-EM
    
  • 5osg – LdRibosome + KSRP - Cryo-EM
    
  • 6uz7 – Ribosome + E-site tRNA + P-site tRNA + IF5B – Kluyveromyces lactis - Cryo-EM
    

• 90S pre-ribosome

• • 6zqa, 6zqb, 6zqc, 6zqd, 6zqe, 6zqf, 6zqg, 7ajt, 7aju, 7d5s, 7d5t, 7d63 - yRibosome - Cryo-EM
    
  • 7d4i - yRibosome + Dhr1 - Cryo-EM
    
  • 5jpq, 5oql, 5wyj, 5wyk, 6rxt, 6rxu, 6rxx, 6rxy, 6rxz, 6rxv – pre-CtRibosome - Cryo-EM
    

• 100S ribosome

• • 6h4n, 6h58 - EcRibosome - Cryo-EM
    
  • 6gzx, 6gzz - TtRibosome - Cryo-EM
    
  • 6fxc - SaRibosome - Cryo-EM
    

• Mitoribosome or mitochondrial ribosome

• 28S small subunit

• • 6gaz – p28S ribosomal subunit – pig - Cryo-EM
    
  • 3jd5 – b28S ribosomal subunit - Cryo-EM
    
  • 6sg9, 6sga, 6sgb – Tb28S ribosomal subunit - Cryo-EM
    
  • 6hiy, 6hiw – Tb28S ribosomal subunit+ IF-3 - Cryo-EM
    
  • 6yw5 – Nc28S - Cryo-EM
    

• 39S large subunit

• • 5oom, 7od4, 7ods, 7odt, 7of4, 7of6, 7oi6, 7oi7, 7oi8, 7oi9, 7oia, 7oib, 7oic, 7oid, 7oie – h39S ribosomal subunit - Cryo-EM
    
  • 5ool – h39S ribosomal subunit + rRNA - Cryo-EM
    
  • 7o9k, 7o9m, 7of0, 7of2, 7of3, 7of5, 7of7, 7pd3 – h39S + proteins - Cryo EM
    
  • 7l20 – h39S + RRF + EFG2 - Cryo-EM
    
  • 7a5h – h39S + RF-R + MTRES1 - Cryo-EM
    
  • 6gb2, 4v19, 4v1a – p39S ribosomal subunit - Cryo-EM
    
  • 7nsh – p39S + RRF + EFG2 - Cryo-EM
    
  • 6hix, 6yxx, 7aoi – Tb39S ribosomal subunit - Cryo-EM
    
  • 7aih – Lm39S - Cryo-EM
    
  • 6yws – Nc39S - Cryo-EM
    

• 55S small+large mitoribosome

• • 6nu2, 6nu3, 6zs9, 7l08 – h55S + RRF - Cryo EM
    
  • 6vlz, 6vmi, 7a5k – h55S + EF-G1 - Cryo EM
    
  • 6ydp, 6ydw – h55S + tRNAMet + EF-G1 - Cryo EM
    
  • 7a5g – h55S + EF-Tu + tRNA - Cryo EM
    
  • 7a5f, 7a5j, 7og4 – h55S + P-tRNA + E-tRNA - Cryo EM
    
  • 7a5i, 7nsj – h55S + tRNA - Cryo EM
    
  • 6zm5, 6zm6, 6zsa, 6zsb, 6zsc, 6zsd, 6zse, 6zsg – h55S + mRNA + tRNA - Cryo EM
    
  • 7nql – h55S + tRNAMet + ICT1 - Cryo EM
    
  • 7nqh – h55S + tRNAMet + RF-1 - Cryo EM
    
  • 7nsi – p55S + RRF + P-tRNA + E-tRNA - Cryo EM
    
  • 6gaw, 5aj4, 5aj3 – p55S - Cryo-EM
    
  • 6xyw – 55S – Arabidopsis thaliana - Cryo-EM
    
  • 6hiv – Tb55S - Cryo-EM
    
  • 7ane – Lm55S - Cryo-EM
    
  • 6z1p – Tet55S - Cryo-EM
    
  • 6ywe, 6ywv, 6ywx, 6ywy – Nc55S + tRNA - Cryo EM
    

}}