This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


All articles

From Proteopedia

Jump to: navigation, search
All pages | Previous page (Sandbox Reserved 752) | Next page (Tyrosylprotein sulfotransferase)

Sm-like proteinSm-like protein 3D structures
Small glutamine-rich tetratricopeptide repeat containing protein alpha
Smallpox (Variola Virus) - Topoisomerase 1B
Sodium-Potassium ATPase
Sodium-calcium exchanger
Sodium-hydrogen exchange regulatory factorSodium-hydrogen exchange regulatory factor 3D structuresSodium-potassium ATPase (Hebrew)
Sodium/glucose cotransporterSodium/glucose cotransporter 3D structures
Sodium channel blockerSofosbuvir
Solute carrier family 12Solute carrier family 12 3D structures
Son of sevenless
Son of sevenless 3D structuresSonia Ferveur/SandboxSonic Hedgehog
Sonic hedgehog 3D structuresSorafenib
Sorting nexin
Sorting nexin 3D structuresSpacefilling representation
Speckle-type POZ proteinSpeckle-type POZ protein 3D structures
SpectrinSpectrin 3D structures
Spermidine/spermine N-acetyltransferaseSpermidine Synthase
Spermidine synthase 3D structuresSphingomyelinase
Sphingosine kinaseSpikeProteinStructureHZ
Spike Protein (Hebrew)Spike proteinSpike protein 3D structures
Spindlin
Spr0440
Squalene-hopene cyclase
Squalene synthase
Srp20-Human Alternative Splicing FactorSsoPox: a natural lactonase with promiscuous phosphotriesterase activities
Stancu Harmon Tiedman Sandbox 12
Standard Residues
Staphylococcal nucleaseStaphylococcal nuclease 3D structures
StathminStathmin-4 3D structures
Statin Pharmacokinetics
Stepler sandbox STAT3Stereochemistry
Steroid Hormones and their receptors
Steroids
Steve McCarron/Sandbox 1
Stimulator of interferon genesStimulator of interferon genes protein
Stimulator of interferon genes protein 3D structuresStishoviteStoke’s shift
Streptavidin Binding SiteStreptomyces griseus Aminopeptidase (SGAP)
Streptomyces griseus proteinase B
Strictosidine SynthaseStringent starvation protein
Stringent starvation protein 3D structures
Stromal Derived Factor 1Structural Biology
Structural Genomics Consortium
Structural annotationStructural basis for RNA unwinding by the DEAD-box protein Drosophila VasaStructural bioinformatics servers
Structural genomics
Structural templatesStructure Gallery Generator
Structure and dynamics of the microtubule-binding hot-spots on the neuronal protein tauStructure of E. coli DnaC helicase loader
Structure of Saccharides (Spanish)Structure of complex membrane proteins solved using cryo-electron microscopy
Structure superposition toolsStructures with Exotic Sources
Student Project 10 for UMass Chemistry 423 Spring 2015
Student Project 1 for UMass Chemistry 423 Spring 2015Student Project 2 for UMass Chemistry 423 Spring 2015Student Project 3 for UMass Chemistry 423 Spring 2015
Student Project 4 for UMass Chemistry 423 Spring 2015Student Project 5 for UMass Chemistry 423 Spring 2015Student Project 6 for UMass Chemistry 423 Spring 2015
Student Project 7 for UMass Chemistry 423 Spring 2015Student Project 8 for UMass Chemistry 423 Spring 2015Student Project 9 for UMass Chemistry 423 Spring 2015
Student ProjectsStudent Projects for UMass Chemistry 423 Spring 2011Student Projects for UMass Chemistry 423 Spring 2012
Student Projects for UMass Chemistry 423 Spring 2012-1Student Projects for UMass Chemistry 423 Spring 2012-10Student Projects for UMass Chemistry 423 Spring 2012-2
Student Projects for UMass Chemistry 423 Spring 2012-3Student Projects for UMass Chemistry 423 Spring 2012-4Student Projects for UMass Chemistry 423 Spring 2012-5
Student Projects for UMass Chemistry 423 Spring 2012-6Student Projects for UMass Chemistry 423 Spring 2012-7Student Projects for UMass Chemistry 423 Spring 2012-8
Student Projects for UMass Chemistry 423 Spring 2012-9Student Projects for UMass Chemistry 423 Spring 2015Student Projects for UMass Chemistry 423 Spring 2016
StudioG24SecL04Tpc5
Styrene oxide isomeraseSubstratesSubtilisin
Subtilisin 3D structures
Succinate-semialdehyde dehydrogenase
Succinate DehydrogenaseSuccinate dehydrogenase 3D structures
Succinyl-CoA synthetase
Succinyl-CoA synthetase 3D structures
Sucrase-isomaltase
Sugar ring puckerSuggestions for new articles
SulfataseSulfatase-modifying factor
Sulfatase 3D structuresSulfhydryl oxidaseSulfhydryl oxidase 3D structures
Sulfide quinone oxidoreductaseSulfite OxidaseSulfotransferase
Sulfotransferase 3D structuresSulfurtransferase
Sunitinib
Superoxide DismutaseSuperoxide Reductase
Superoxide dismutase 3D structures
Suppression of RNA Silencing by Viruses
SurvivinSussman Sandbox
Swiss-PDBViewer = DeepView
Symplekin
SymporterSymporter 3D structures
Syn and anti nucleosidesSynapsin
Synaptosomal-associated proteinSynaptotagmin
Synaptotagmin 3D structures
SyncytinSyntaxinSyntaxin-binding protein
Syntaxin 3D structuresSyntenin
Syntrophin
T-box proteins
T-cell receptorT-cell receptor 3D structures
T. brucei Phosphodiesterase B1
T4 RNA ligase 2 (Rnl2)T7 RNA POLYMERASE INITIATION COMPLEX sandboxT7 RNA Polymerase
T7 Rna polymerase initiation complex sandbox 2
TAL effectorTAS2R10
TATA-Binding ProteinTATA-binding protein 3D structures
TBX1TBX15TBX3
TBX5
TEM1-beta-Lactamase/beta-lactamase Inhibitor Protein (BLIP)TEM1 Class Antibiotic Resistance Proteins
TEST 2558 2TET Enzymes
TGF-beta receptorTGF-beta receptor 3D structures
TGF beta signaling pathway
TIR1 ubiquitin ligase
TIR domain-containing adapter proteinTLR signaling pathway
TNF receptor-associated factorTNF receptor-associated factor 3D structures
TOPRIM domain protein
TRAILTRAP dicarboxylate transporter, DctP subunit
TRNA-guanine transglycosylaseTRNA-guanine transglycosylase 3D structures
TRNA:m2G6 methyltransferase TrmN/Trm14
TRNA methyltransferaseTRNA methyltransferase 3D structures
TRNA synthetases (Hebrew)
TRNase activity
Tachyplesin
TacrineTafamidis
Tailspike proteinTailspike protein 3D structures
TalinTalin 3D structures
Tammi Bonavita SandboxTamoxifen
Taq DNA polymerase (Hebrew)
Tat protein
Tau-tubulin kinaseTau-tubulin kinase 3D structuresTau protein
Tau protein 3D structures
Taylor 2 Gal4SandboxTaylor Gal4 SandboxTaylor Gal4 sandbox 2
Taylor SARS-CoV2 ProteaseTaylor histone sandboxTaylor met repressor
Taylor sandbox 1Taylor sandboxk ricin rRNA modification site
Tdp-43Teaching Scenes, Tutorials, and Educators' Pages
Technology-Enhanced Science ActivitiesTedsandbox
TelaprevirTelethonin
TelomeraseTelomerase-associated proteinTelomerase 3D structures
Telomerase Reverse Transcriptase
TempTemperature color schemes
Temperature value
Temperature value vs. resolution
Tenebrio molitor Antifreeze Protein (TmAFP)TenofovirTenofovir disoproxil
Terminal Uridylyl Transferase
TerminaseTerminase 3D Structures
Test030618Test1
Test1113Test112Test130323
Test160122Test180919Test2558
TestHbondsTestPragueTest 2558 2406
Test 2558 3Test 2558 4Test 2558 new
Test 3625Test 3639Test 4531
Test 4959Test ALTest Interactivity
Test Page avidinTestgpTesthaifa55
Testing Jmol 12.2.16Testing PDB File Sizes
Testosterone
Tetanus toxin
Tetherin
Tetracycline repressor proteinTetracycline repressor protein 3D structuresTetrahydroprotoberberine N-methyltransferase
Tetrameric alcohol dehydrogenasesTetramerization domain of acetylcholinesteraseThe Bacterial Flagellar Hook
The BioMolViz ProjectThe Building Blocks
The Escherichia coli sensitive to lysis D (SlyD) protein
The Podin Family
The Structure and Mechanism of HexokinaseThe Structure of PI3K
The surface lipoprotein E (VlsE) of the Lyme disease spirochete bacteriumTheoretical esterases
Theoretical models
Thermal motion of peptide
ThermoceptionThermolysinThermolysin 3D structures
Thiamin phosphate synthaseThiaminase
Thioester protein crosslinksThioesterase
Thioesterase 3D structuresThioether protein crosslinks
Thiol:disulfide interchange protein
Thiol:disulfide interchange protein 3D structures
Thiol peroxidaseThiol peroxidase 3D structuresThiolase
Thiolase 3D structuresThioredoxinThioredoxin 3D structures
Thioredoxin Glutathione ReductaseThioredoxin Reductase
Thioredoxin reductase 3D structures
Thrombin
Thrombin (hebrew)Thrombin 3D StructuresThrombin heavy chain
Thrombin light chainThrombospondin
Thumm prac sandboxThymidine kinaseThymidine kinase 3D structures
Thymidylate kinaseThymidylate kinase 3D structuresThymidylate synthase
Thymidylate synthase 3D structures
Thyroid hormone receptorThyroid hormone receptor 3D structures
Tic40
TimololTimothy Locksmith sandbox Heat Sock Factor
Tiotropium bromideTipranavirTissue factor
Tissue factor pathway inhibitorTitinTitin 3D structures
Titin Structure & FunctionTitin related diseasesTitle
Tobacco Etch Virus (TEV) ProteaseTobacco Mosaic Virus
TolTolA
TolBTolQTolR
Toll-like Receptor 3D structuresToll-like Receptors
Tom SandboxTom almog/UCP1
Tom sandbox1Tomato aspermy virus protein 2b Suppression of RNA SilencingTon
TonB
TopoisomeraseTopoisomerase 3D structures
Topoisomerase binding proteinTopoisomerases: A Biochemical OverviewTorpedo Californica Acetylcholinesterase in complex with an (R)-Tacrine-(10)-Hupyridone inhibitor
Torpedo Californica Acetylcholinesterase in complex with an (S)-Tacrine-(10)-Hupyridone inhibitorTorpedo californica acetylcholinesterase with alkylene-linked tacrine dimer (5 carbon linker)Torpedo californica acetylcholinesterase with alkylene-linked tacrine dimer (7 carbon linker)
Torpedo californica acetylcholinesterase with bifunctional inhibitorTositumomabToxT
Toxin Tx7335Toxins
Trandolapril
Transaldolase
Transaldolase 3D structures
Transcription-repair coupling factorTranscription-repair coupling factor 3D structures
Transcription Termination Factor RhoTranscription and RNA Processing
Transcription factor tau
Transcription initiation factorTranscription initiation factors 3D structures
Transcriptional activatorTranscriptional activator 3D structures
TransducinTransducin 3D structures
Transfer RNA (tRNA)Transfer RNA tour
TransferasesTransferrin
Transferrin-binding proteinTransferrin 3D structuresTransferrin receptor
Transient Receptor Potential Cation Channel Subfamily V Member 1 (TRPV1)
Transition state analogTransketolaseTransketolase 3D structures
TranslationTranslocation domain
Transmembrane (cell surface) receptorsTransmembrane protease serine 2
Transport inhibitor response 1
TransposaseTransposase 3D structures
TransthyretinTransthyretin 3D structures
TrastuzumabTreatment for Primary open-angle glaucomaTreatment for malignant neoplasms of prostate
Treatment non-small cell lung carcinomaTreatment of Epstein–Barr virus infectionTreatment of Gastro-esophageal Reflux Disease
Treatment of Gaucher diseaseTreatment of TuberculosisTreatment of acute lymphocytic leukemia
Treatment of asthmaTreatment of bipolar disorderTreatment of bladder infections
Treatment of breast cancerTreatment of chickenpoxTreatment of chronic myelogenous leukemia
Treatment of cytomegalovirus infectionsTreatment of gastric ulcerTreatment of gastrointestinal stromal tumor
Treatment of hepatitis CTreatment of hepatocellular carcinomaTreatment of herpes
Treatment of hyperlipidemiaTreatment of multiple myelomaTreatment of obsessive compulsive disorder
Treatment of pancreatic cancerTreatment of peptic ulcerTreatment of renal cell carcinoma
Treatment of schizophreniaTreatment of shinglesTreatments:ACE Inhibitor Pharmacokinetics References
Treatments:AChE Inhibitor ReferencesTreatments:Alzheimer's DiseaseTreatments:Antifungal
Treatments:Bacterial InfectionsTreatments:CancerTreatments:Depression
Treatments:DiabetesTreatments:Dipeptidyl Peptidase-4 Inhibitor PharmacokineticsTreatments:Erectile Dysfunction
Treatments:Glitazone Pharmacokinetics ReferencesTreatments:HIVTreatments:HIV Protease Inhibitor Pharmacokinetics References
Treatments:HypercholeseterolemiaTreatments:Hypertension
Treatments:InflammationTreatments:InfluenzaTreatments:M2 Proton Channel Inhibitor Pharmacokinetics
Treatments:NSAID ReferencesTreatments:Neuraminidase Inhibitor Pharmacokinetics ReferencesTreatments:Opioid drugs
Treatments:Retroviral Integrase Inhibitor Pharmacokinetics ReferencesTreatments:Statin Pharmacokinetics ReferencesTreatments:TYKI References
Trehalulose synthase
Trichodiene synthase
Trimethoprim
Triose Phosphate IsomeraseTriose Phosphate Isomerase Structure & Mechanism
Triose phosphate isomerase 3D structuresTriosephosphate Isomerase
Tripeptidyl peptidase
Tritopodin
TrkB tyrosine kinase receptor
TropomyosinTropomyosin 3D structures
TroponinTroponin 3D structures
Truvada
Trypanothione reductase
TrypsinTrypsin (Hebrew)Trypsin 3D structures
Trypsin inhibitorTrypsin inhibitor 3D structures
TryptaseTryptase inhibitor
Tryptophan RNA-binding attenuation protein
Tryptophan hydroxylase 1 with bound tryptophanTryptophan synthaseTryptophan synthase 3D structures
Tuba
Tuba 3D structuresTubulinTubulin 3D Structures
Tubulin acetyltransferaseTubulin tyrosine ligaseTubulin tyrosine ligase 3D structures
Tumor necrosis factor
Tumor necrosis factor 3D structures
Tumor necrosis factor ligand superfamilyTumor necrosis factor ligand superfamily 3D structuresTumor necrosis factor receptor
Tumor necrosis factor receptor 3D structuresTumor susceptibility gene 101
Turns in Proteins
Twinfilin
Tyler marcinko/sandbox 1
Type III effector AvrB complexed with ADPType III effector AvrB complexed with a high-affinity RIN4 peptide
Types of ligands
Tyrone Evans Hox Proteins sandboxTyrosinase
Tyrosinase 3D structures
Tyrosine-kinase inhibitors
Tyrosine Kinase Inhibitor Pharmacokinetics
Tyrosine kinase
Tyrosine kinase 3D structuresTyrosine kinase receptor
Tyrosine kinase receptor 3D structures
Tyrosine phosphataseTyrosine phosphatase 3D structures

Previous page (Sandbox Reserved 752) | Next page (Tyrosylprotein sulfotransferase)

Views
Personal tools